Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NKX2-1P43699 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.44□□□□□ -2.02
NKX2-1P43699 AC009487.2-201ENST00000420969 6821 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NKX2-1P43699 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NKX2-1P43699 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NKX2-1P43699 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NKX2-1P43699 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.43□□□□□ -2.02
NKX2-1P43699 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.43□□□□□ -2.02
NKX2-1P43699 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
NKX2-1P43699 SNORD56.5-201ENST00000364281 72 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 SNORA26.7-201ENST00000391288 122 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 AL356432.1-201ENST00000405809 419 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 MIR548K-201ENST00000408406 116 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.43□□□□□ -2.02
NKX2-1P43699 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.43□□□□□ -2.02
NKX2-1P43699 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.43□□□□□ -2.02
NKX2-1P43699 HMGB1P18-201ENST00000438801 619 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.43□□□□□ -2.02
NKX2-1P43699 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.43□□□□□ -2.02
NKX2-1P43699 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.43□□□□□ -2.02
NKX2-1P43699 snoU109.2-201ENST00000459316 135 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.43□□□□□ -2.02
NKX2-1P43699 RNA5SP112-201ENST00000515937 99 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 SNORA31.6-201ENST00000516241 130 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 SNORA43.2-201ENST00000516652 128 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 RNU6-1088P-201ENST00000516850 104 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 RNA5SP454-201ENST00000517231 127 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 AC109329.1-201ENST00000518744 317 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.43□□□□□ -2.02
NKX2-1P43699 AP005597.4-201ENST00000526762 229 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NKX2-1P43699 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 CPDP1-201ENST00000579660 283 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 AC103810.1-201ENST00000579873 453 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 AC008121.1-201ENST00000603244 268 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 C8orf59P2-201ENST00000603441 271 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 AL449363.1-201ENST00000617815 186 ntBASIC2.43□□□□□ -2.02
NKX2-1P43699 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.43□□□□□ -2.02
NKX2-1P43699 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.43□□□□□ -2.02
NKX2-1P43699 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.43□□□□□ -2.02
NKX2-1P43699 MTCO1P12-201ENST00000414273 1543 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.42□□□□□ -2.02
NKX2-1P43699 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NKX2-1P43699 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-1P43699 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
NKX2-1P43699 RNU6-486P-201ENST00000363116 107 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 RNU5E-7P-201ENST00000365290 117 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-1P43699 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-1P43699 SNORD67-201ENST00000390833 111 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 U3.19-201ENST00000390893 196 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 FO393413.1-201ENST00000402892 195 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AL590004.2-201ENST00000404787 371 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 RNA5SP390-201ENST00000410191 113 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 RNU2-25P-201ENST00000411041 191 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 RPL19P1-201ENST00000411635 428 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AL117339.3-201ENST00000418733 162 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-1P43699 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-1P43699 RPS29P6-201ENST00000438196 145 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-1P43699 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-1P43699 RPL39P40-201ENST00000445481 146 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AC012308.1-201ENST00000451232 178 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NKX2-1P43699 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-1P43699 RPL23AP45-201ENST00000476406 468 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 RN7SL499P-201ENST00000481141 276 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.42□□□□□ -2.02
NKX2-1P43699 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-1P43699 AC008526.1-201ENST00000509149 338 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-1P43699 RNU6-323P-201ENST00000521915 107 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 HSPE1P20-201ENST00000538133 289 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AP000763.2-201ENST00000540641 163 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AC079598.5-201ENST00000547460 117 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.42□□□□□ -2.02
NKX2-1P43699 AC026464.5-201ENST00000562497 722 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.42□□□□□ -2.02
NKX2-1P43699 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.42□□□□□ -2.02
NKX2-1P43699 MIR4765-201ENST00000585007 77 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-1P43699 OR1M4P-201ENST00000589199 287 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 RNU6-85P-201ENST00000605989 107 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AC005046.1-201ENST00000608515 625 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 AC011890.2-201ENST00000613393 294 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.42□□□□□ -2.02
NKX2-1P43699 AC007318.2-201ENST00000620999 243 ntBASIC2.42□□□□□ -2.02
NKX2-1P43699 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
NKX2-1P43699 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.41□□□□□ -2.02
NKX2-1P43699 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.41□□□□□ -2.02
NKX2-1P43699 AC073325.2-201ENST00000339545 159 ntBASIC2.41□□□□□ -2.02
NKX2-1P43699 RNU6-562P-201ENST00000362731 107 ntBASIC2.41□□□□□ -2.02
NKX2-1P43699 RNU1-35P-201ENST00000362782 153 ntBASIC2.41□□□□□ -2.02
NKX2-1P43699 Y_RNA.70-201ENST00000362886 110 ntBASIC2.41□□□□□ -2.02
NKX2-1P43699 RNU6-461P-201ENST00000364195 107 ntBASIC2.41□□□□□ -2.02
NKX2-1P43699 RNU6-593P-201ENST00000364716 112 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms