Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCNFP41002 AF127577.6-201ENST00000623352 2191 ntBASIC4□□□□□ -1.77
CCNFP41002 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCNFP41002 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4□□□□□ -1.77
CCNFP41002 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
CCNFP41002 Y_RNA.84-201ENST00000363011 104 ntBASIC4□□□□□ -1.77
CCNFP41002 RNU6-270P-201ENST00000364131 105 ntBASIC4□□□□□ -1.77
CCNFP41002 RNU1-100P-201ENST00000365255 165 ntBASIC4□□□□□ -1.77
CCNFP41002 RNU6-926P-201ENST00000384075 107 ntBASIC4□□□□□ -1.77
CCNFP41002 RNU6-843P-201ENST00000384454 104 ntBASIC4□□□□□ -1.77
CCNFP41002 FTH1P15-201ENST00000406984 280 ntBASIC4□□□□□ -1.77
CCNFP41002 MIR1251-201ENST00000408552 70 ntBASIC4□□□□□ -1.77
CCNFP41002 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4□□□□□ -1.77
CCNFP41002 SDAD1P3-201ENST00000427380 333 ntBASIC4□□□□□ -1.77
CCNFP41002 AC083863.1-201ENST00000438811 231 ntBASIC4□□□□□ -1.77
CCNFP41002 HMGN2P7-201ENST00000456186 273 ntBASIC4□□□□□ -1.77
CCNFP41002 AC091153.1-201ENST00000466297 402 ntBASIC4□□□□□ -1.77
CCNFP41002 SNRPGP3-201ENST00000469405 227 ntBASIC4□□□□□ -1.77
CCNFP41002 RPS27AP10-201ENST00000496103 208 ntBASIC4□□□□□ -1.77
CCNFP41002 Y_RNA.713-201ENST00000517013 96 ntBASIC4□□□□□ -1.77
CCNFP41002 MIR2355-201ENST00000517199 87 ntBASIC4□□□□□ -1.77
CCNFP41002 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4□□□□□ -1.77
CCNFP41002 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4□□□□□ -1.77
CCNFP41002 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4□□□□□ -1.77
CCNFP41002 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4□□□□□ -1.77
CCNFP41002 NACAP3-201ENST00000552100 481 ntBASIC4□□□□□ -1.77
CCNFP41002 AC007375.1-201ENST00000554513 578 ntBASIC4□□□□□ -1.77
CCNFP41002 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4□□□□□ -1.77
CCNFP41002 AC023824.2-201ENST00000566185 400 ntBASIC4□□□□□ -1.77
CCNFP41002 HSPE1P7-201ENST00000604681 321 ntBASIC4□□□□□ -1.77
CCNFP41002 Y_RNA.772-201ENST00000606692 102 ntBASIC4□□□□□ -1.77
CCNFP41002 AC141273.2-201ENST00000618989 130 ntBASIC4□□□□□ -1.77
CCNFP41002 U7.8-201ENST00000619968 63 ntBASIC4□□□□□ -1.77
CCNFP41002 AC073308.1-201ENST00000623696 305 ntBASIC4□□□□□ -1.77
CCNFP41002 SCARNA4-201ENST00000629045 128 ntBASIC4□□□□□ -1.77
CCNFP41002 MIR492-201ENST00000638676 116 ntBASIC4□□□□□ -1.77
CCNFP41002 FTO-223ENST00000640179 210 ntTSL 5 BASIC4□□□□□ -1.77
CCNFP41002 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCNFP41002 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
CCNFP41002 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4□□□□□ -1.77
CCNFP41002 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4□□□□□ -1.77
CCNFP41002 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCNFP41002 ADAM3A-203ENST00000461344 2157 ntBASIC3.99□□□□□ -1.77
CCNFP41002 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCNFP41002 RNU6-879P-201ENST00000364328 108 ntBASIC3.99□□□□□ -1.77
CCNFP41002 RNU6-1286P-201ENST00000383871 107 ntBASIC3.99□□□□□ -1.77
CCNFP41002 RNY3P4-201ENST00000384428 101 ntBASIC3.99□□□□□ -1.77
CCNFP41002 Y_RNA.504-201ENST00000384481 104 ntBASIC3.99□□□□□ -1.77
CCNFP41002 MIR544A-201ENST00000384855 91 ntBASIC3.99□□□□□ -1.77
CCNFP41002 AP000567.1-201ENST00000406413 156 ntBASIC3.99□□□□□ -1.77
CCNFP41002 EIF1AXP1-201ENST00000419267 435 ntBASIC3.99□□□□□ -1.77
CCNFP41002 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.99□□□□□ -1.77
CCNFP41002 AC099548.1-201ENST00000421443 426 ntBASIC3.99□□□□□ -1.77
CCNFP41002 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.99□□□□□ -1.77
CCNFP41002 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.99□□□□□ -1.77
CCNFP41002 AC087477.1-201ENST00000465747 340 ntBASIC3.99□□□□□ -1.77
CCNFP41002 MRPL42P6-201ENST00000486397 371 ntBASIC3.99□□□□□ -1.77
CCNFP41002 AC025465.3-201ENST00000510570 311 ntBASIC3.99□□□□□ -1.77
CCNFP41002 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.99□□□□□ -1.77
CCNFP41002 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.99□□□□□ -1.77
CCNFP41002 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCNFP41002 AL590392.1-201ENST00000604960 446 ntBASIC3.99□□□□□ -1.77
CCNFP41002 AC019159.1-201ENST00000605094 187 ntBASIC3.99□□□□□ -1.77
CCNFP41002 MIR6134-201ENST00000617606 109 ntBASIC3.99□□□□□ -1.77
CCNFP41002 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.99□□□□□ -1.77
CCNFP41002 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.99□□□□□ -1.77
CCNFP41002 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCNFP41002 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
CCNFP41002 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.99□□□□□ -1.77
CCNFP41002 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCNFP41002 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.98□□□□□ -1.77
CCNFP41002 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCNFP41002 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCNFP41002 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.98□□□□□ -1.77
CCNFP41002 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.98□□□□□ -1.77
CCNFP41002 Y_RNA.54-201ENST00000362766 105 ntBASIC3.98□□□□□ -1.77
CCNFP41002 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.98□□□□□ -1.77
CCNFP41002 RNU6-541P-201ENST00000384709 110 ntBASIC3.98□□□□□ -1.77
CCNFP41002 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCNFP41002 RNU6-1203P-201ENST00000410703 110 ntBASIC3.98□□□□□ -1.77
CCNFP41002 AC074117.2-201ENST00000417130 397 ntBASIC3.98□□□□□ -1.77
CCNFP41002 RPS26P21-201ENST00000475397 348 ntBASIC3.98□□□□□ -1.77
CCNFP41002 DEFB108E-201ENST00000524692 240 ntBASIC3.98□□□□□ -1.77
CCNFP41002 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.98□□□□□ -1.77
CCNFP41002 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.98□□□□□ -1.77
CCNFP41002 AC025884.1-201ENST00000556034 378 ntBASIC3.98□□□□□ -1.77
CCNFP41002 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.98□□□□□ -1.77
CCNFP41002 AC136932.1-201ENST00000574771 208 ntBASIC3.98□□□□□ -1.77
CCNFP41002 AC025627.2-201ENST00000576220 160 ntBASIC3.98□□□□□ -1.77
CCNFP41002 AL109918.3-201ENST00000603072 338 ntBASIC3.98□□□□□ -1.77
CCNFP41002 AL391261.4-201ENST00000616012 481 ntBASIC3.98□□□□□ -1.77
CCNFP41002 AL138880.2-201ENST00000616214 239 ntBASIC3.98□□□□□ -1.77
CCNFP41002 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.98□□□□□ -1.77
CCNFP41002 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.98□□□□□ -1.77
CCNFP41002 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.98□□□□□ -1.77
CCNFP41002 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.98□□□□□ -1.77
CCNFP41002 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.98□□□□□ -1.77
CCNFP41002 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.97□□□□□ -1.77
CCNFP41002 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCNFP41002 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms