Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 RNA5SP99-201ENST00000364020 114 ntBASIC1.58□□□□□ -2.16
PCK1P35558 RNU6-501P-201ENST00000364072 100 ntBASIC1.58□□□□□ -2.16
PCK1P35558 RNU6-395P-201ENST00000365662 106 ntBASIC1.58□□□□□ -2.16
PCK1P35558 MIR10A-201ENST00000385043 110 ntBASIC1.58□□□□□ -2.16
PCK1P35558 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
PCK1P35558 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PCK1P35558 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.58□□□□□ -2.16
PCK1P35558 UBE2V1P10-201ENST00000414685 269 ntBASIC1.58□□□□□ -2.16
PCK1P35558 AL593851.1-201ENST00000426171 157 ntBASIC1.58□□□□□ -2.16
PCK1P35558 AC119618.1-201ENST00000434191 222 ntBASIC1.58□□□□□ -2.16
PCK1P35558 MTCYBP39-201ENST00000437562 491 ntBASIC1.58□□□□□ -2.16
PCK1P35558 RNU1-98P-201ENST00000458992 160 ntBASIC1.58□□□□□ -2.16
PCK1P35558 AC006512.1-201ENST00000468816 291 ntBASIC1.58□□□□□ -2.16
PCK1P35558 AC117503.1-201ENST00000472241 394 ntBASIC1.58□□□□□ -2.16
PCK1P35558 RBBP4P6-201ENST00000508098 202 ntBASIC1.58□□□□□ -2.16
PCK1P35558 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.58□□□□□ -2.16
PCK1P35558 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.58□□□□□ -2.16
PCK1P35558 RNU6-237P-201ENST00000515985 71 ntBASIC1.58□□□□□ -2.16
PCK1P35558 RNU6-1220P-201ENST00000517126 108 ntBASIC1.58□□□□□ -2.16
PCK1P35558 RNU6-667P-201ENST00000517186 102 ntBASIC1.58□□□□□ -2.16
PCK1P35558 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
PCK1P35558 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
PCK1P35558 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.58□□□□□ -2.16
PCK1P35558 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.58□□□□□ -2.16
PCK1P35558 AC093249.1-201ENST00000567049 203 ntBASIC1.58□□□□□ -2.16
PCK1P35558 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
PCK1P35558 MIR4285-201ENST00000581001 85 ntBASIC1.58□□□□□ -2.16
PCK1P35558 HMGN1P30-201ENST00000589286 268 ntBASIC1.58□□□□□ -2.16
PCK1P35558 BNIP3P30-201ENST00000601184 574 ntBASIC1.58□□□□□ -2.16
PCK1P35558 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.58□□□□□ -2.16
PCK1P35558 AL031775.1-201ENST00000607014 887 ntBASIC1.58□□□□□ -2.16
PCK1P35558 AP000240.1-201ENST00000609910 452 ntBASIC1.58□□□□□ -2.16
PCK1P35558 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.58□□□□□ -2.16
PCK1P35558 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.58□□□□□ -2.16
PCK1P35558 AC008121.3-201ENST00000618726 433 ntBASIC1.58□□□□□ -2.16
PCK1P35558 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PCK1P35558 MIR126-201ENST00000362291 85 ntBASIC1.57□□□□□ -2.16
PCK1P35558 RNU5E-1-201ENST00000362477 120 ntBASIC1.57□□□□□ -2.16
PCK1P35558 RNA5SP432-201ENST00000362480 116 ntBASIC1.57□□□□□ -2.16
PCK1P35558 RNU5F-7P-201ENST00000363696 115 ntBASIC1.57□□□□□ -2.16
PCK1P35558 RNU6-1179P-201ENST00000384667 107 ntBASIC1.57□□□□□ -2.16
PCK1P35558 MIR578-201ENST00000384828 96 ntBASIC1.57□□□□□ -2.16
PCK1P35558 RNU6-482P-201ENST00000391068 107 ntBASIC1.57□□□□□ -2.16
PCK1P35558 MIR1283-2-201ENST00000408621 87 ntBASIC1.57□□□□□ -2.16
PCK1P35558 RNU6-955P-201ENST00000410497 104 ntBASIC1.57□□□□□ -2.16
PCK1P35558 Y_RNA.608-201ENST00000410647 95 ntBASIC1.57□□□□□ -2.16
PCK1P35558 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.57□□□□□ -2.16
PCK1P35558 AC127391.1-201ENST00000411737 98 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AL031779.1-201ENST00000415663 330 ntBASIC1.57□□□□□ -2.16
PCK1P35558 Z73417.1-201ENST00000447373 778 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.57□□□□□ -2.16
PCK1P35558 KATNBL1P6-201ENST00000453433 915 ntBASIC1.57□□□□□ -2.16
PCK1P35558 MTND1P12-201ENST00000455231 147 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.57□□□□□ -2.16
PCK1P35558 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AC108078.2-201ENST00000510750 236 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.57□□□□□ -2.16
PCK1P35558 RNU2-53P-201ENST00000516257 147 ntBASIC1.57□□□□□ -2.16
PCK1P35558 NDUFA5P6-201ENST00000542110 379 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AC136619.2-201ENST00000563361 631 ntBASIC1.57□□□□□ -2.16
PCK1P35558 PCMTD1P2-201ENST00000565017 355 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AC008751.2-201ENST00000597885 980 ntBASIC1.57□□□□□ -2.16
PCK1P35558 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.57□□□□□ -2.16
PCK1P35558 CLIC4P2-201ENST00000601934 717 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AC073410.2-201ENST00000603240 332 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AC174048.1-201ENST00000603389 144 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AC021646.1-201ENST00000605469 484 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
PCK1P35558 AC090517.3-201ENST00000625170 141 ntBASIC1.57□□□□□ -2.16
PCK1P35558 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.57□□□□□ -2.16
PCK1P35558 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PCK1P35558 MTND5P10-201ENST00000603719 1809 ntBASIC1.56□□□□□ -2.16
PCK1P35558 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
PCK1P35558 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
PCK1P35558 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PCK1P35558 SNORA24.1-201ENST00000384401 135 ntBASIC1.56□□□□□ -2.16
PCK1P35558 RNU1-57P-201ENST00000384491 166 ntBASIC1.56□□□□□ -2.16
PCK1P35558 MIR186-201ENST00000384988 86 ntBASIC1.56□□□□□ -2.16
PCK1P35558 SNORD115.1-201ENST00000391109 76 ntBASIC1.56□□□□□ -2.16
PCK1P35558 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
PCK1P35558 RPL22P18-201ENST00000417197 377 ntBASIC1.56□□□□□ -2.16
PCK1P35558 AC012308.1-201ENST00000451232 178 ntBASIC1.56□□□□□ -2.16
PCK1P35558 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.56□□□□□ -2.16
PCK1P35558 FO393415.2-201ENST00000480085 343 ntBASIC1.56□□□□□ -2.16
PCK1P35558 AC021146.2-201ENST00000504736 556 ntBASIC1.56□□□□□ -2.16
PCK1P35558 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.56□□□□□ -2.16
PCK1P35558 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.56□□□□□ -2.16
PCK1P35558 ADI1P3-201ENST00000549509 470 ntBASIC1.56□□□□□ -2.16
PCK1P35558 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.56□□□□□ -2.16
PCK1P35558 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
PCK1P35558 MIR4713-201ENST00000582691 75 ntBASIC1.56□□□□□ -2.16
PCK1P35558 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.56□□□□□ -2.16
PCK1P35558 SNRPGP17-201ENST00000603780 214 ntBASIC1.56□□□□□ -2.16
PCK1P35558 RNU6-87P-201ENST00000607561 108 ntBASIC1.56□□□□□ -2.16
PCK1P35558 AC108479.2-201ENST00000617314 601 ntBASIC1.56□□□□□ -2.16
PCK1P35558 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
PCK1P35558 RNU6-500P-201ENST00000362349 107 ntBASIC1.55□□□□□ -2.16
PCK1P35558 Y_RNA.40-201ENST00000362645 93 ntBASIC1.55□□□□□ -2.16
PCK1P35558 RNU6-384P-201ENST00000364900 104 ntBASIC1.55□□□□□ -2.16
PCK1P35558 RNU6-72P-201ENST00000384285 79 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms