Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MTCYBP40-201ENST00000509390 1135 ntBASIC2.71□□□□□ -1.98
HOXD13P35453 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXD13P35453 MIR4672-201ENST00000583126 81 ntBASIC2.71□□□□□ -1.98
HOXD13P35453 AC093783.1-201ENST00000612976 329 ntBASIC2.71□□□□□ -1.98
HOXD13P35453 HMGB1P24-202ENST00000615653 685 ntBASIC2.71□□□□□ -1.98
HOXD13P35453 AC015540.1-201ENST00000615828 501 ntBASIC2.71□□□□□ -1.98
HOXD13P35453 FO624990.1-201ENST00000636373 85 ntBASIC2.71□□□□□ -1.98
HOXD13P35453 U4.7-201ENST00000638126 106 ntBASIC2.71□□□□□ -1.98
HOXD13P35453 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXD13P35453 AL354685.2-201ENST00000448218 1447 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-37P-201ENST00000362692 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-11P-201ENST00000364234 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-1303P-201ENST00000364841 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-25P-201ENST00000383873 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-1-201ENST00000383898 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-48P-201ENST00000384161 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-36P-201ENST00000384172 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-4P-201ENST00000384205 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-5P-201ENST00000384238 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-622P-201ENST00000384272 103 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-3P-201ENST00000384314 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-16P-201ENST00000384385 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-15P-201ENST00000384534 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 Y_RNA.517-201ENST00000384551 106 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-2-201ENST00000384627 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-29P-201ENST00000384637 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-9-201ENST00000384776 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-33P-201ENST00000384793 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 CYCSP48-201ENST00000417124 323 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXD13P35453 AC003685.2-201ENST00000422795 395 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXD13P35453 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HOXD13P35453 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXD13P35453 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXD13P35453 AC023050.3-201ENST00000541142 333 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 AL512310.1-201ENST00000548639 172 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXD13P35453 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXD13P35453 AC090897.2-201ENST00000581715 130 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 MIR3162-201ENST00000581818 82 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 AL356575.1-201ENST00000603008 283 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 AC007621.1-201ENST00000604544 437 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 RNU6-6P-201ENST00000606623 107 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 AC008121.3-201ENST00000618726 433 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 AL359880.1-201ENST00000621879 266 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 AP003400.5-201ENST00000624827 617 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 AC243829.7-201ENST00000633081 225 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 AC093010.3-201ENST00000570269 15214 ntBASIC2.7□□□□□ -1.98
HOXD13P35453 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HOXD13P35453 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXD13P35453 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXD13P35453 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXD13P35453 MIR21-201ENST00000362134 72 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 Y_RNA.409-201ENST00000383990 98 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 SNORA67.4-201ENST00000384688 142 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 MIR186-201ENST00000384988 86 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 AL359511.1-201ENST00000402970 211 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXD13P35453 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXD13P35453 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXD13P35453 SUMO1P4-201ENST00000429430 302 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 VN1R108P-201ENST00000431580 830 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.69□□□□□ -1.98
HOXD13P35453 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXD13P35453 FDX1P2-201ENST00000450769 375 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 AC008526.1-201ENST00000509149 338 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 RNA5SP401-201ENST00000515920 127 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXD13P35453 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXD13P35453 AL138963.2-201ENST00000605137 226 ntBASIC2.69□□□□□ -1.98
HOXD13P35453 RNU6-266P-201ENST00000364225 107 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 RNA5SP125-201ENST00000364843 120 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 Y_RNA.381-201ENST00000365666 102 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HOXD13P35453 AL162578.1-201ENST00000406202 378 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 RNU2-23P-201ENST00000410545 195 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 MORF4L1P6-201ENST00000418771 268 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXD13P35453 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXD13P35453 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXD13P35453 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXD13P35453 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXD13P35453 RPL23AP45-201ENST00000476406 468 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 AP001025.1-201ENST00000486139 332 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXD13P35453 AF213884.2-201ENST00000510417 903 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 SNORA31.15-201ENST00000516771 132 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 AP005902.1-201ENST00000521358 186 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 CYCSP27-201ENST00000527643 293 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.68□□□□□ -1.98
HOXD13P35453 AL512360.1-201ENST00000555346 234 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 RPL12P50-201ENST00000603116 116 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 AC006023.1-201ENST00000603944 259 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 AL355297.2-201ENST00000604792 129 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXD13P35453 U4.3-201ENST00000621047 82 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HOXD13P35453 AC010297.1-201ENST00000623948 149 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms