Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 U2.9-201ENST00000615427 191 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 U2.11-201ENST00000616345 191 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 U2.2-201ENST00000616535 191 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 RMST_4.1-201ENST00000616886 107 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 U2.3-201ENST00000617785 191 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 U6.42-201ENST00000618440 107 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 U2.19-201ENST00000618602 191 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 RNU2-1-201ENST00000618664 191 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 U2.6-201ENST00000619225 191 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 U2.5-201ENST00000619465 191 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 U2.10-201ENST00000620268 191 ntBASIC1.92□□□□□ -2.1
SHMT2P34897 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.92□□□□□ -2.1
SHMT2P34897 AL354685.2-201ENST00000448218 1447 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SHMT2P34897 RNU6-858P-201ENST00000362436 107 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 SNORA3A-201ENST00000364113 130 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 SNORA62.1-201ENST00000364287 154 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 RNU6-282P-201ENST00000365357 103 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 MIR1-2-201ENST00000384961 85 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SHMT2P34897 SNORA46.1-201ENST00000391069 153 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.91□□□□□ -2.1
SHMT2P34897 RNU6-1140P-201ENST00000410517 106 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 OR6C66P-201ENST00000414917 930 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 EIF4EP4-201ENST00000424916 578 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.91□□□□□ -2.1
SHMT2P34897 AL162395.1-201ENST00000457882 422 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 snoU13.26-201ENST00000459452 105 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 MTAPP1-201ENST00000489154 819 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 YWHAEP4-201ENST00000505390 198 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 AC104806.1-201ENST00000508720 308 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.91□□□□□ -2.1
SHMT2P34897 OR11H5P-201ENST00000554039 926 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.91□□□□□ -2.1
SHMT2P34897 AC008088.1-201ENST00000580993 280 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 AL590229.1-201ENST00000603497 542 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 AL713866.2-201ENST00000603579 219 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 AC073114.1-201ENST00000612027 490 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 SDR42E1P4-201ENST00000620894 481 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
SHMT2P34897 AC011155.2-201ENST00000623202 216 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 SCARNA4-202ENST00000625402 129 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
SHMT2P34897 AC009487.4-201ENST00000624969 3585 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 AC138393.1-203ENST00000327086 343 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 RNU6-1097P-201ENST00000363586 107 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 RNU6-487P-201ENST00000365430 104 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 RNU6-843P-201ENST00000384454 104 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 MIR454-201ENST00000390180 115 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 RNU6-550P-201ENST00000391057 101 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 RPL21P90-201ENST00000415692 466 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 BX295541.1-201ENST00000417774 250 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 AC133104.1-201ENST00000429100 218 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.9□□□□□ -2.11
SHMT2P34897 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.9□□□□□ -2.11
SHMT2P34897 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.9□□□□□ -2.11
SHMT2P34897 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.9□□□□□ -2.11
SHMT2P34897 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.9□□□□□ -2.11
SHMT2P34897 AC117503.1-201ENST00000472241 394 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 UBL5P3-201ENST00000475112 231 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 AC068781.1-201ENST00000488231 618 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.9□□□□□ -2.11
SHMT2P34897 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.9□□□□□ -2.11
SHMT2P34897 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.9□□□□□ -2.11
SHMT2P34897 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.9□□□□□ -2.11
SHMT2P34897 MIR3913-1-201ENST00000577744 102 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 AC025165.5-201ENST00000602802 578 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 AC021646.1-201ENST00000605469 484 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 AC006566.1-201ENST00000608943 513 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 MIR3529-201ENST00000637713 78 ntBASIC1.9□□□□□ -2.11
SHMT2P34897 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
SHMT2P34897 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
SHMT2P34897 HAUS6P2-201ENST00000433254 2404 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.89□□□□□ -2.11
SHMT2P34897 RNU6-622P-201ENST00000384272 103 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 RNU1-148P-201ENST00000384472 162 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 RNU2-3P-201ENST00000410144 191 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 PGBD4P6-201ENST00000421501 610 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.89□□□□□ -2.11
SHMT2P34897 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.89□□□□□ -2.11
SHMT2P34897 KATNBL1P3-201ENST00000443475 909 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 AC010095.1-201ENST00000443543 144 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.89□□□□□ -2.11
SHMT2P34897 AP001025.1-201ENST00000486139 332 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 AC140059.1-201ENST00000489238 361 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.89□□□□□ -2.11
SHMT2P34897 MTND3P25-201ENST00000509243 135 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 Y_RNA.695-201ENST00000516715 107 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.89□□□□□ -2.11
SHMT2P34897 CR383656.8-201ENST00000549046 145 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.89□□□□□ -2.11
SHMT2P34897 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.89□□□□□ -2.11
SHMT2P34897 ANP32BP3-201ENST00000559213 706 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 MIR4775-201ENST00000581168 75 ntBASIC1.89□□□□□ -2.11
SHMT2P34897 AC040904.1-201ENST00000590850 223 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms