Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AL117351.1-201ENST00000438864 766 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 MTCO1P44-201ENST00000441935 243 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 AL590365.1-201ENST00000450788 243 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 RNU1-123P-201ENST00000458950 160 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 SNORD97-201ENST00000459187 142 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.99□□□□□ -2.25
HLA-DMBP28068 RN7SKP179-201ENST00000516126 217 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 RNU6-677P-201ENST00000516914 101 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.99□□□□□ -2.25
HLA-DMBP28068 AC090821.2-201ENST00000523552 176 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.99□□□□□ -2.25
HLA-DMBP28068 AP003034.1-201ENST00000534621 422 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 MTCYBP33-201ENST00000575007 1130 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.99□□□□□ -2.25
HLA-DMBP28068 VN1R82P-201ENST00000601481 356 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 AC174048.1-201ENST00000603389 144 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 AC021755.4-201ENST00000616620 456 ntBASIC0.99□□□□□ -2.25
HLA-DMBP28068 Y_RNA.67-201ENST00000362870 100 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 Y_RNA.192-201ENST00000363977 102 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 RNA5SP390-201ENST00000410191 113 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.98□□□□□ -2.25
HLA-DMBP28068 RPS15AP12-201ENST00000419498 388 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 AL365338.1-201ENST00000422282 858 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.98□□□□□ -2.25
HLA-DMBP28068 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.98□□□□□ -2.25
HLA-DMBP28068 AC245517.4-201ENST00000448601 281 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HLA-DMBP28068 AL139824.2-201ENST00000458731 1095 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 RPL31P58-201ENST00000469001 379 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 RPL30P6-201ENST00000475925 342 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 AC010409.1-201ENST00000487382 476 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 AC099513.1-201ENST00000490423 301 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 AC093259.1-201ENST00000509755 300 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 AC025465.3-201ENST00000510570 311 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.98□□□□□ -2.25
HLA-DMBP28068 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.98□□□□□ -2.25
HLA-DMBP28068 SUB1P4-201ENST00000566062 339 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.98□□□□□ -2.25
HLA-DMBP28068 AL022154.1-201ENST00000604698 785 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 RNU6-88P-201ENST00000606801 100 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 AC097468.3-201ENST00000607956 456 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 AL353770.2-201ENST00000620024 78 ntBASIC0.98□□□□□ -2.25
HLA-DMBP28068 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HLA-DMBP28068 MIR26B-201ENST00000362251 77 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 RNU6-72P-201ENST00000384285 79 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 Y_RNA.623-201ENST00000411128 95 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AC009518.2-201ENST00000418056 731 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DMBP28068 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DMBP28068 MTND5P25-201ENST00000430499 799 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DMBP28068 AL353752.1-201ENST00000454946 260 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AL583843.1-201ENST00000456070 346 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.97□□□□□ -2.25
HLA-DMBP28068 AC004223.1-201ENST00000479840 271 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 RNU6-965P-201ENST00000516721 96 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.97□□□□□ -2.25
HLA-DMBP28068 AC010376.1-201ENST00000522101 334 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.97□□□□□ -2.25
HLA-DMBP28068 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.97□□□□□ -2.25
HLA-DMBP28068 TRAV32-201ENST00000553993 340 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.97□□□□□ -2.25
HLA-DMBP28068 MTND4LP25-201ENST00000570218 163 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 MIR3169-201ENST00000578032 83 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 KC877982.1-201ENST00000602313 470 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AL606834.3-201ENST00000602615 496 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AP001485.1-201ENST00000604799 199 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.97□□□□□ -2.25
HLA-DMBP28068 MIR15A-201ENST00000607334 83 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AC130324.3-201ENST00000614165 542 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AL589994.2-201ENST00000621124 579 ntBASIC0.97□□□□□ -2.25
HLA-DMBP28068 AP000560.1-201ENST00000624150 1937 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 RNU6-511P-201ENST00000363496 107 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 Y_RNA.238-201ENST00000364441 102 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
HLA-DMBP28068 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.96□□□□□ -2.26
HLA-DMBP28068 CBX3P6-201ENST00000430257 527 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DMBP28068 NDUFB1P2-201ENST00000449477 176 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 AC012308.1-201ENST00000451232 178 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DMBP28068 snoU13.9-201ENST00000458927 103 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 AC116353.3-201ENST00000511215 249 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 RNA5SP445-201ENST00000515889 115 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 SNORA31.17-201ENST00000516953 127 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 RNU6-902P-201ENST00000517212 91 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.96□□□□□ -2.26
HLA-DMBP28068 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DMBP28068 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.96□□□□□ -2.26
HLA-DMBP28068 MIR544B-201ENST00000582372 78 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 AC112220.3-201ENST00000605502 502 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 AL158211.2-201ENST00000607282 395 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 AC072039.2-201ENST00000608883 439 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 MIR6078-201ENST00000611069 100 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 AL159153.1-201ENST00000619688 317 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
HLA-DMBP28068 FRG1KP-201ENST00000623592 341 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 MIR1248-201ENST00000629190 106 ntBASIC0.96□□□□□ -2.26
HLA-DMBP28068 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.96□□□□□ -2.26
HLA-DMBP28068 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms