Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL8A2P25067 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL8A2P25067 RNU6-179P-201ENST00000363350 107 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 SNORA3A-201ENST00000364113 130 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 SNORA16.1-201ENST00000364597 132 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 RNU6-108P-201ENST00000365558 107 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 RNU6-1042P-201ENST00000384204 107 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 MIR301A-201ENST00000385261 86 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AL663109.1-201ENST00000411498 844 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.51□□□□□ -2.17
COL8A2P25067 RPL26P27-201ENST00000414397 437 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AC092809.3-201ENST00000415453 231 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.51□□□□□ -2.17
COL8A2P25067 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.51□□□□□ -2.17
COL8A2P25067 AC007560.1-201ENST00000426912 237 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.51□□□□□ -2.17
COL8A2P25067 AL358934.1-201ENST00000432346 324 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AL645568.3-201ENST00000433683 316 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AL451074.3-201ENST00000437709 472 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AC098831.1-201ENST00000440661 216 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.51□□□□□ -2.17
COL8A2P25067 MTATP6P7-201ENST00000453315 681 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 MTCYBP1-201ENST00000454315 1119 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 C1DP4-201ENST00000455429 424 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 DYNLL1P5-201ENST00000467158 270 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 RN7SL274P-201ENST00000492268 272 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AC116562.3-201ENST00000506136 177 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.51□□□□□ -2.17
COL8A2P25067 MTND3P5-201ENST00000512798 333 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.51□□□□□ -2.17
COL8A2P25067 SNORA25.15-201ENST00000516487 89 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 Y_RNA.689-201ENST00000516589 107 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 RNU6-914P-201ENST00000516749 109 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 RNU2-44P-201ENST00000516795 194 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.51□□□□□ -2.17
COL8A2P25067 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.51□□□□□ -2.17
COL8A2P25067 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.51□□□□□ -2.17
COL8A2P25067 AC068587.5-201ENST00000528506 175 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.51□□□□□ -2.17
COL8A2P25067 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.51□□□□□ -2.17
COL8A2P25067 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.51□□□□□ -2.17
COL8A2P25067 AC012493.3-201ENST00000604494 112 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AL158032.1-201ENST00000605401 106 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AL121992.2-201ENST00000606262 256 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 AL139286.2-201ENST00000606838 396 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 Z99571.1-201ENST00000636677 394 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 ADAM3A-203ENST00000461344 2157 ntBASIC1.51□□□□□ -2.17
COL8A2P25067 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL8A2P25067 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.5□□□□□ -2.17
COL8A2P25067 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL8A2P25067 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.5□□□□□ -2.17
COL8A2P25067 RNU6-181P-201ENST00000363225 107 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 RNU4-24P-201ENST00000364565 139 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 RNA5SP125-201ENST00000364843 120 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 RNU6-282P-201ENST00000365357 103 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 Y_RNA.367-201ENST00000365544 101 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
COL8A2P25067 RNU5A-6P-201ENST00000384136 116 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 SNORA24.1-201ENST00000384401 135 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 RNU6-456P-201ENST00000384493 107 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 Y_RNA.534-201ENST00000384599 112 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 Y_RNA.559-201ENST00000384686 107 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 Y_RNA.582-201ENST00000391023 95 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL8A2P25067 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC114491.1-201ENST00000416095 246 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC016907.1-201ENST00000419483 435 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.5□□□□□ -2.17
COL8A2P25067 AL591704.1-201ENST00000432574 275 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 MTATP6P16-201ENST00000434543 526 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.5□□□□□ -2.17
COL8A2P25067 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC022364.2-201ENST00000457963 554 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 TPT1P7-201ENST00000458300 517 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 RNA5SP233-201ENST00000459153 113 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 RPS3AP17-201ENST00000472594 777 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC010493.1-201ENST00000513479 292 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.5□□□□□ -2.17
COL8A2P25067 RNU6-991P-201ENST00000516168 107 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 RNU6-405P-201ENST00000516637 110 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 RNU6-445P-201ENST00000516949 107 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 SCARNA3-201ENST00000517097 143 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.5□□□□□ -2.17
COL8A2P25067 AP005902.1-201ENST00000521358 186 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.5□□□□□ -2.17
COL8A2P25067 ADI1P3-201ENST00000549509 470 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 NACAP3-201ENST00000552100 481 ntBASIC1.5□□□□□ -2.17
COL8A2P25067 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL8A2P25067 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.5□□□□□ -2.17
COL8A2P25067 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms