Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AGGF1P4-201ENST00000568249 801 ntBASIC2.5□□□□□ -2.01
ERCC2P18074 MIR4446-201ENST00000578505 67 ntBASIC2.5□□□□□ -2.01
ERCC2P18074 MIR5583-1-201ENST00000580941 59 ntBASIC2.5□□□□□ -2.01
ERCC2P18074 AC073410.2-201ENST00000603240 332 ntBASIC2.5□□□□□ -2.01
ERCC2P18074 RNU6-6P-201ENST00000606623 107 ntBASIC2.5□□□□□ -2.01
ERCC2P18074 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.5□□□□□ -2.01
ERCC2P18074 AC139792.3-201ENST00000623525 224 ntBASIC2.5□□□□□ -2.01
ERCC2P18074 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
ERCC2P18074 AL354685.2-201ENST00000448218 1447 ntBASIC2.5□□□□□ -2.01
ERCC2P18074 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ERCC2P18074 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ERCC2P18074 RNA5SP393-201ENST00000363423 117 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 SNORA25.6-201ENST00000364121 118 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 Y_RNA.409-201ENST00000383990 98 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 RNU1-57P-201ENST00000384491 166 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 RNU2-16P-201ENST00000410712 136 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.49□□□□□ -2.01
ERCC2P18074 AC009963.1-201ENST00000417265 157 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AC008267.5-201ENST00000424928 265 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ERCC2P18074 DLGAP5P1-201ENST00000430307 464 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.49□□□□□ -2.01
ERCC2P18074 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.49□□□□□ -2.01
ERCC2P18074 MTND2P33-201ENST00000506452 1031 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.49□□□□□ -2.01
ERCC2P18074 PSMA3P-201ENST00000555485 635 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AL133241.1-201ENST00000556832 487 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AC090897.2-201ENST00000581715 130 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 MIR5194-201ENST00000582634 120 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AC004223.2-201ENST00000590309 544 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AC017083.3-201ENST00000609955 700 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AC104073.3-201ENST00000610942 955 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AL158209.2-201ENST00000619266 216 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 MIR5739-201ENST00000619803 80 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.49□□□□□ -2.01
ERCC2P18074 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.49□□□□□ -2.01
ERCC2P18074 AP003400.5-201ENST00000624827 617 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 MIR6863-201ENST00000636112 90 ntBASIC2.49□□□□□ -2.01
ERCC2P18074 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.49□□□□□ -2.01
ERCC2P18074 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
ERCC2P18074 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ERCC2P18074 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
ERCC2P18074 RNU6-529P-201ENST00000363383 104 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 RNU4-75P-201ENST00000364621 146 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 U8.8-201ENST00000365399 135 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.48□□□□□ -2.01
ERCC2P18074 MIR186-201ENST00000384988 86 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.48□□□□□ -2.01
ERCC2P18074 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.48□□□□□ -2.01
ERCC2P18074 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.48□□□□□ -2.01
ERCC2P18074 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.48□□□□□ -2.01
ERCC2P18074 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.48□□□□□ -2.01
ERCC2P18074 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.48□□□□□ -2.01
ERCC2P18074 RNU7-180P-201ENST00000459240 63 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.48□□□□□ -2.01
ERCC2P18074 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.48□□□□□ -2.01
ERCC2P18074 AP005902.1-201ENST00000521358 186 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 AC105137.2-201ENST00000569073 466 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.48□□□□□ -2.01
ERCC2P18074 AC103987.3-201ENST00000582071 292 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 AL713866.2-201ENST00000603579 219 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 AC002044.1-201ENST00000606707 158 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
ERCC2P18074 uc_338.15-201ENST00000615470 191 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.48□□□□□ -2.01
ERCC2P18074 AC243829.7-201ENST00000633081 225 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 OR5AK4P-201ENST00000635912 903 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 FO624990.1-201ENST00000636373 85 ntBASIC2.48□□□□□ -2.01
ERCC2P18074 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ERCC2P18074 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.48□□□□□ -2.01
ERCC2P18074 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
ERCC2P18074 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ERCC2P18074 MIR6073-201ENST00000352083 89 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 Y_RNA.255-201ENST00000364581 97 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 Y_RNA.318-201ENST00000365131 97 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 Y_RNA.480-201ENST00000384364 102 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
ERCC2P18074 RNA5SP390-201ENST00000410191 113 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 RNU2-63P-201ENST00000410792 194 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ERCC2P18074 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.47□□□□□ -2.01
ERCC2P18074 CKS1BP2-201ENST00000497342 240 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 AC026436.1-201ENST00000510537 270 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 SNORA31.15-201ENST00000516771 132 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 SNORA25.17-201ENST00000517184 124 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 AC109329.1-201ENST00000518744 317 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 AP003034.1-201ENST00000534621 422 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 MTCO3P23-201ENST00000561363 289 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.47□□□□□ -2.01
ERCC2P18074 RPL30P11-203ENST00000598995 310 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 AC123912.5-201ENST00000605470 343 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 MIR6852-201ENST00000621699 66 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 MIR1291-201ENST00000627649 87 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 U4.7-201ENST00000638126 106 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 AC016717.2-201ENST00000609089 5141 ntBASIC2.47□□□□□ -2.01
ERCC2P18074 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ERCC2P18074 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
ERCC2P18074 RNU6-527P-201ENST00000363425 104 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms