Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD44P16070 RNU6-529P-201ENST00000363383 104 ntBASIC5.75□□□□□ -1.49
CD44P16070 MIR181A2-201ENST00000384863 110 ntBASIC5.75□□□□□ -1.49
CD44P16070 AC009237.10-201ENST00000414112 510 ntBASIC5.75□□□□□ -1.49
CD44P16070 AL591419.1-201ENST00000427423 339 ntBASIC5.75□□□□□ -1.49
CD44P16070 AL445584.1-201ENST00000431451 330 ntBASIC5.75□□□□□ -1.49
CD44P16070 AC010099.1-201ENST00000455434 375 ntBASIC5.75□□□□□ -1.49
CD44P16070 RN7SL466P-201ENST00000497546 295 ntBASIC5.75□□□□□ -1.49
CD44P16070 AC231760.1-201ENST00000498002 260 ntBASIC5.75□□□□□ -1.49
CD44P16070 RNA5SP20-201ENST00000515976 84 ntBASIC5.75□□□□□ -1.49
CD44P16070 AC107934.2-201ENST00000518653 310 ntBASIC5.75□□□□□ -1.49
CD44P16070 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CD44P16070 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.75□□□□□ -1.49
CD44P16070 HSPE1P7-201ENST00000604681 321 ntBASIC5.75□□□□□ -1.49
CD44P16070 U6.73-201ENST00000619194 103 ntBASIC5.75□□□□□ -1.49
CD44P16070 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.75□□□□□ -1.49
CD44P16070 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.75□□□□□ -1.49
CD44P16070 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD44P16070 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD44P16070 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD44P16070 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CD44P16070 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CD44P16070 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
CD44P16070 AC026951.1-201ENST00000559530 2459 ntBASIC5.74□□□□□ -1.49
CD44P16070 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.74□□□□□ -1.49
CD44P16070 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
CD44P16070 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CD44P16070 RNA5SP515-201ENST00000364570 118 ntBASIC5.74□□□□□ -1.49
CD44P16070 Y_RNA.467-201ENST00000384297 102 ntBASIC5.74□□□□□ -1.49
CD44P16070 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CD44P16070 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CD44P16070 HMGN2P30-201ENST00000423237 256 ntBASIC5.74□□□□□ -1.49
CD44P16070 AC092047.1-201ENST00000424997 240 ntBASIC5.74□□□□□ -1.49
CD44P16070 AC063976.3-201ENST00000426849 329 ntBASIC5.74□□□□□ -1.49
CD44P16070 AC009238.2-201ENST00000431026 355 ntBASIC5.74□□□□□ -1.49
CD44P16070 HMGN2P20-201ENST00000437531 273 ntBASIC5.74□□□□□ -1.49
CD44P16070 RNU7-172P-201ENST00000517125 64 ntBASIC5.74□□□□□ -1.49
CD44P16070 MIR3618-201ENST00000580330 88 ntBASIC5.74□□□□□ -1.49
CD44P16070 MIR6778-201ENST00000617912 73 ntBASIC5.74□□□□□ -1.49
CD44P16070 AL691477.1-201ENST00000624398 162 ntBASIC5.74□□□□□ -1.49
CD44P16070 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
CD44P16070 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CD44P16070 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CD44P16070 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.74□□□□□ -1.49
CD44P16070 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CD44P16070 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CD44P16070 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD44P16070 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD44P16070 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD44P16070 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
CD44P16070 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD44P16070 RNU6-363P-201ENST00000362895 105 ntBASIC5.73□□□□□ -1.49
CD44P16070 MIR586-201ENST00000385035 97 ntBASIC5.73□□□□□ -1.49
CD44P16070 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.73□□□□□ -1.49
CD44P16070 AC010598.1-201ENST00000510378 103 ntBASIC5.73□□□□□ -1.49
CD44P16070 SNORD95-201ENST00000579879 68 ntBASIC5.73□□□□□ -1.49
CD44P16070 FTX_3.1-201ENST00000610451 147 ntBASIC5.73□□□□□ -1.49
CD44P16070 AC018628.1-201ENST00000624147 3819 ntBASIC5.73□□□□□ -1.49
CD44P16070 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD44P16070 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CD44P16070 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CD44P16070 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CD44P16070 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CD44P16070 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CD44P16070 AL121839.2-201ENST00000565058 6943 ntBASIC5.73□□□□□ -1.49
CD44P16070 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CD44P16070 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.72□□□□□ -1.49
CD44P16070 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.72□□□□□ -1.49
CD44P16070 MIR548A2-201ENST00000384956 97 ntBASIC5.72□□□□□ -1.49
CD44P16070 MIR1282-201ENST00000408865 101 ntBASIC5.72□□□□□ -1.49
CD44P16070 Z98742.3-201ENST00000418637 326 ntBASIC5.72□□□□□ -1.49
CD44P16070 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.72□□□□□ -1.49
CD44P16070 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.72□□□□□ -1.49
CD44P16070 AC012468.1-201ENST00000604888 430 ntBASIC5.72□□□□□ -1.49
CD44P16070 AC087741.2-201ENST00000619415 172 ntBASIC5.72□□□□□ -1.49
CD44P16070 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CD44P16070 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CD44P16070 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
CD44P16070 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.72□□□□□ -1.49
CD44P16070 GVINP1-202ENST00000531871 7271 ntBASIC5.72□□□□□ -1.49
CD44P16070 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CD44P16070 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CD44P16070 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CD44P16070 AC063976.2-201ENST00000425667 3556 ntBASIC5.71□□□□□ -1.49
CD44P16070 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.71□□□□□ -1.49
CD44P16070 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CD44P16070 C4BPAP1-201ENST00000415474 1893 ntBASIC5.71□□□□□ -1.5
CD44P16070 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CD44P16070 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.71□□□□□ -1.5
CD44P16070 U3.2-201ENST00000362981 210 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms