Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.86□□□□□ -1.95
PCNAP12004 AC010889.1-201ENST00000566193 2666 ntBASIC2.86□□□□□ -1.95
PCNAP12004 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.85□□□□□ -1.95
PCNAP12004 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.85□□□□□ -1.95
PCNAP12004 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCNAP12004 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCNAP12004 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
PCNAP12004 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
PCNAP12004 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.85□□□□□ -1.95
PCNAP12004 RNU6-428P-201ENST00000362942 107 ntBASIC2.85□□□□□ -1.95
PCNAP12004 VTRNA1-1-201ENST00000363120 99 ntBASIC2.85□□□□□ -1.95
PCNAP12004 SNORD46.1-201ENST00000364139 104 ntBASIC2.85□□□□□ -1.95
PCNAP12004 Y_RNA.212-201ENST00000364177 102 ntBASIC2.85□□□□□ -1.95
PCNAP12004 RNU5E-4P-201ENST00000364931 120 ntBASIC2.85□□□□□ -1.95
PCNAP12004 Y_RNA.301-201ENST00000364990 103 ntBASIC2.85□□□□□ -1.95
PCNAP12004 RNU5E-7P-201ENST00000365290 117 ntBASIC2.85□□□□□ -1.95
PCNAP12004 RNU6-827P-201ENST00000365553 106 ntBASIC2.85□□□□□ -1.95
PCNAP12004 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
PCNAP12004 RAP1BP3-201ENST00000407180 549 ntBASIC2.85□□□□□ -1.95
PCNAP12004 SNORA11-201ENST00000408789 128 ntBASIC2.85□□□□□ -1.95
PCNAP12004 AL096701.2-201ENST00000416920 238 ntBASIC2.85□□□□□ -1.95
PCNAP12004 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.85□□□□□ -1.95
PCNAP12004 AL359672.1-201ENST00000442302 409 ntBASIC2.85□□□□□ -1.95
PCNAP12004 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.85□□□□□ -1.95
PCNAP12004 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.85□□□□□ -1.95
PCNAP12004 AC008571.1-201ENST00000467232 300 ntBASIC2.85□□□□□ -1.95
PCNAP12004 RPL27AP5-201ENST00000469428 449 ntBASIC2.85□□□□□ -1.95
PCNAP12004 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.85□□□□□ -1.95
PCNAP12004 ACA59.2-201ENST00000517061 156 ntBASIC2.85□□□□□ -1.95
PCNAP12004 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.85□□□□□ -1.95
PCNAP12004 AP004607.1-201ENST00000524456 203 ntBASIC2.85□□□□□ -1.95
PCNAP12004 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
PCNAP12004 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.85□□□□□ -1.95
PCNAP12004 AC025281.1-201ENST00000567026 265 ntBASIC2.85□□□□□ -1.95
PCNAP12004 UBE2V2P2-201ENST00000587677 504 ntBASIC2.85□□□□□ -1.95
PCNAP12004 AC091152.3-201ENST00000604227 325 ntBASIC2.85□□□□□ -1.95
PCNAP12004 AL138726.1-201ENST00000614873 333 ntBASIC2.85□□□□□ -1.95
PCNAP12004 AC104260.1-201ENST00000616660 539 ntBASIC2.85□□□□□ -1.95
PCNAP12004 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.85□□□□□ -1.95
PCNAP12004 SCARNA4-202ENST00000625402 129 ntBASIC2.85□□□□□ -1.95
PCNAP12004 FO624990.1-201ENST00000636373 85 ntBASIC2.85□□□□□ -1.95
PCNAP12004 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.85□□□□□ -1.95
PCNAP12004 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.85□□□□□ -1.95
PCNAP12004 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCNAP12004 MTND4P12-201ENST00000498999 1377 ntBASIC2.85□□□□□ -1.95
PCNAP12004 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
PCNAP12004 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.84□□□□□ -1.95
PCNAP12004 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCNAP12004 AC135776.4-201ENST00000624300 1904 ntBASIC2.84□□□□□ -1.95
PCNAP12004 RNA5SP354-201ENST00000391247 136 ntBASIC2.84□□□□□ -1.95
PCNAP12004 AL122016.1-201ENST00000403365 367 ntBASIC2.84□□□□□ -1.95
PCNAP12004 AL133475.1-201ENST00000404414 305 ntBASIC2.84□□□□□ -1.95
PCNAP12004 AL356432.1-201ENST00000405809 419 ntBASIC2.84□□□□□ -1.95
PCNAP12004 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.84□□□□□ -1.95
PCNAP12004 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.84□□□□□ -1.95
PCNAP12004 RPL32P28-201ENST00000443577 397 ntBASIC2.84□□□□□ -1.95
PCNAP12004 AC026801.1-201ENST00000497178 464 ntBASIC2.84□□□□□ -1.95
PCNAP12004 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.84□□□□□ -1.95
PCNAP12004 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.84□□□□□ -1.95
PCNAP12004 MRPS36P2-201ENST00000512569 299 ntBASIC2.84□□□□□ -1.95
PCNAP12004 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.84□□□□□ -1.95
PCNAP12004 SNORA43.2-201ENST00000516652 128 ntBASIC2.84□□□□□ -1.95
PCNAP12004 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.84□□□□□ -1.95
PCNAP12004 AC103996.1-201ENST00000555468 102 ntBASIC2.84□□□□□ -1.95
PCNAP12004 AC023043.3-201ENST00000593113 385 ntBASIC2.84□□□□□ -1.95
PCNAP12004 AC007179.3-201ENST00000604976 235 ntBASIC2.84□□□□□ -1.95
PCNAP12004 YPEL5P2-201ENST00000605553 359 ntBASIC2.84□□□□□ -1.95
PCNAP12004 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.84□□□□□ -1.95
PCNAP12004 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.84□□□□□ -1.95
PCNAP12004 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.84□□□□□ -1.96
PCNAP12004 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
PCNAP12004 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
PCNAP12004 MAPK10-266ENST00000641066 6555 ntBASIC2.83□□□□□ -1.96
PCNAP12004 MIR422A-201ENST00000362286 90 ntBASIC2.83□□□□□ -1.96
PCNAP12004 SNORD116-20-201ENST00000384529 92 ntBASIC2.83□□□□□ -1.96
PCNAP12004 RNU6-750P-201ENST00000390946 107 ntBASIC2.83□□□□□ -1.96
PCNAP12004 AL445529.1-201ENST00000398713 389 ntBASIC2.83□□□□□ -1.96
PCNAP12004 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.83□□□□□ -1.96
PCNAP12004 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.83□□□□□ -1.96
PCNAP12004 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.83□□□□□ -1.96
PCNAP12004 MTND4LP16-201ENST00000440828 295 ntBASIC2.83□□□□□ -1.96
PCNAP12004 AC009296.1-201ENST00000443146 155 ntBASIC2.83□□□□□ -1.96
PCNAP12004 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.83□□□□□ -1.96
PCNAP12004 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCNAP12004 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.83□□□□□ -1.96
PCNAP12004 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.83□□□□□ -1.96
PCNAP12004 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.83□□□□□ -1.96
PCNAP12004 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.83□□□□□ -1.96
PCNAP12004 AC008526.1-201ENST00000509149 338 ntBASIC2.83□□□□□ -1.96
PCNAP12004 AC046134.1-201ENST00000514454 666 ntBASIC2.83□□□□□ -1.96
PCNAP12004 Y_RNA.682-201ENST00000516457 100 ntBASIC2.83□□□□□ -1.96
PCNAP12004 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.83□□□□□ -1.96
PCNAP12004 COPS8P3-201ENST00000526024 482 ntBASIC2.83□□□□□ -1.96
PCNAP12004 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.83□□□□□ -1.96
PCNAP12004 AC091135.1-201ENST00000585943 307 ntBASIC2.83□□□□□ -1.96
PCNAP12004 AC012493.2-201ENST00000595083 291 ntBASIC2.83□□□□□ -1.96
PCNAP12004 AC096577.2-201ENST00000611455 153 ntBASIC2.83□□□□□ -1.96
PCNAP12004 UCA1.1-201ENST00000620952 75 ntBASIC2.83□□□□□ -1.96
PCNAP12004 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCNAP12004 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms