Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MIR9-3-201ENST00000385084 90 ntBASIC2.15□□□□□ -2.07
TOP1P11387 RNU6-278P-201ENST00000390945 109 ntBASIC2.15□□□□□ -2.07
TOP1P11387 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TOP1P11387 RNU2-36P-201ENST00000410361 191 ntBASIC2.15□□□□□ -2.07
TOP1P11387 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.15□□□□□ -2.07
TOP1P11387 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.15□□□□□ -2.07
TOP1P11387 BX295541.1-201ENST00000417774 250 ntBASIC2.15□□□□□ -2.07
TOP1P11387 AL161788.1-201ENST00000441805 169 ntBASIC2.15□□□□□ -2.07
TOP1P11387 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.15□□□□□ -2.07
TOP1P11387 PMCHL2-203ENST00000457791 237 ntBASIC2.15□□□□□ -2.07
TOP1P11387 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.15□□□□□ -2.07
TOP1P11387 AC091435.1-201ENST00000505442 584 ntBASIC2.15□□□□□ -2.07
TOP1P11387 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.15□□□□□ -2.07
TOP1P11387 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.15□□□□□ -2.07
TOP1P11387 RNU6-581P-201ENST00000516214 105 ntBASIC2.15□□□□□ -2.07
TOP1P11387 RNU6-1183P-201ENST00000517054 60 ntBASIC2.15□□□□□ -2.07
TOP1P11387 AC022616.3-201ENST00000523940 148 ntBASIC2.15□□□□□ -2.07
TOP1P11387 OR5AQ1P-201ENST00000527596 927 ntBASIC2.15□□□□□ -2.07
TOP1P11387 AC079598.5-201ENST00000547460 117 ntBASIC2.15□□□□□ -2.07
TOP1P11387 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.15□□□□□ -2.07
TOP1P11387 AC137800.2-201ENST00000574375 120 ntBASIC2.15□□□□□ -2.07
TOP1P11387 MIR3124-201ENST00000582636 67 ntBASIC2.15□□□□□ -2.07
TOP1P11387 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.15□□□□□ -2.07
TOP1P11387 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.15□□□□□ -2.07
TOP1P11387 AC099842.1-201ENST00000619919 596 ntBASIC2.15□□□□□ -2.07
TOP1P11387 CDC27P3-201ENST00000635418 1910 ntBASIC2.15□□□□□ -2.07
TOP1P11387 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
TOP1P11387 RNU6-1284P-201ENST00000363701 100 ntBASIC2.14□□□□□ -2.07
TOP1P11387 RNU6-39P-201ENST00000384344 107 ntBASIC2.14□□□□□ -2.07
TOP1P11387 MIR95-201ENST00000385072 81 ntBASIC2.14□□□□□ -2.07
TOP1P11387 HMGN2P39-201ENST00000398005 273 ntBASIC2.14□□□□□ -2.07
TOP1P11387 RPS3AP36-201ENST00000398190 775 ntBASIC2.14□□□□□ -2.07
TOP1P11387 RNU2-66P-201ENST00000410650 161 ntBASIC2.14□□□□□ -2.07
TOP1P11387 ELOCP17-201ENST00000414751 326 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.14□□□□□ -2.07
TOP1P11387 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.14□□□□□ -2.07
TOP1P11387 C1DP2-201ENST00000418167 426 ntBASIC2.14□□□□□ -2.07
TOP1P11387 CYCSP49-201ENST00000420810 319 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AL160275.3-201ENST00000423876 471 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.14□□□□□ -2.07
TOP1P11387 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.14□□□□□ -2.07
TOP1P11387 BRK1P2-201ENST00000442875 223 ntBASIC2.14□□□□□ -2.07
TOP1P11387 MTCO2P7-201ENST00000446518 666 ntBASIC2.14□□□□□ -2.07
TOP1P11387 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.14□□□□□ -2.07
TOP1P11387 AC079448.1-201ENST00000449377 373 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AC092001.1-201ENST00000453012 261 ntBASIC2.14□□□□□ -2.07
TOP1P11387 MTCYBP1-201ENST00000454315 1119 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AC139453.3-201ENST00000493276 369 ntBASIC2.14□□□□□ -2.07
TOP1P11387 RPL23AP63-201ENST00000498752 471 ntBASIC2.14□□□□□ -2.07
TOP1P11387 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.14□□□□□ -2.07
TOP1P11387 MTND2P33-201ENST00000506452 1031 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.14□□□□□ -2.07
TOP1P11387 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.14□□□□□ -2.07
TOP1P11387 AC015712.3-201ENST00000559380 164 ntBASIC2.14□□□□□ -2.07
TOP1P11387 MIR4524B-201ENST00000581569 115 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AC087683.1-201ENST00000591187 441 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AC005034.5-201ENST00000604219 466 ntBASIC2.14□□□□□ -2.07
TOP1P11387 MIR6134-201ENST00000617606 109 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AC138627.2-201ENST00000624202 601 ntBASIC2.14□□□□□ -2.07
TOP1P11387 AL359757.2-201ENST00000624309 274 ntBASIC2.14□□□□□ -2.07
TOP1P11387 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
TOP1P11387 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
TOP1P11387 Y_RNA.41-201ENST00000362646 102 ntBASIC2.13□□□□□ -2.07
TOP1P11387 RNU5E-6P-201ENST00000365574 115 ntBASIC2.13□□□□□ -2.07
TOP1P11387 Y_RNA.559-201ENST00000384686 107 ntBASIC2.13□□□□□ -2.07
TOP1P11387 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TOP1P11387 MRPL42P2-201ENST00000403169 426 ntBASIC2.13□□□□□ -2.07
TOP1P11387 RNU2-62P-201ENST00000410868 191 ntBASIC2.13□□□□□ -2.07
TOP1P11387 AL663109.1-201ENST00000411498 844 ntBASIC2.13□□□□□ -2.07
TOP1P11387 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.13□□□□□ -2.07
TOP1P11387 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.13□□□□□ -2.07
TOP1P11387 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.13□□□□□ -2.07
TOP1P11387 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.13□□□□□ -2.07
TOP1P11387 MTCO3P5-201ENST00000433620 714 ntBASIC2.13□□□□□ -2.07
TOP1P11387 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.13□□□□□ -2.07
TOP1P11387 RPS15AP9-201ENST00000439856 381 ntBASIC2.13□□□□□ -2.07
TOP1P11387 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.13□□□□□ -2.07
TOP1P11387 MTND1P27-201ENST00000451117 902 ntBASIC2.13□□□□□ -2.07
TOP1P11387 RPL23AP3-201ENST00000453844 468 ntBASIC2.13□□□□□ -2.07
TOP1P11387 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.13□□□□□ -2.07
TOP1P11387 MTCO2P29-201ENST00000465212 189 ntBASIC2.13□□□□□ -2.07
TOP1P11387 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.13□□□□□ -2.07
TOP1P11387 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.13□□□□□ -2.07
TOP1P11387 RPS29P11-201ENST00000496507 171 ntBASIC2.13□□□□□ -2.07
TOP1P11387 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.13□□□□□ -2.07
TOP1P11387 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.13□□□□□ -2.07
TOP1P11387 RNU6-405P-201ENST00000516637 110 ntBASIC2.13□□□□□ -2.07
TOP1P11387 RNU6-430P-201ENST00000517078 107 ntBASIC2.13□□□□□ -2.07
TOP1P11387 AC090572.1-201ENST00000519251 160 ntBASIC2.13□□□□□ -2.07
TOP1P11387 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.13□□□□□ -2.07
TOP1P11387 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.13□□□□□ -2.07
TOP1P11387 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.13□□□□□ -2.07
TOP1P11387 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.13□□□□□ -2.07
TOP1P11387 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.13□□□□□ -2.07
TOP1P11387 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.13□□□□□ -2.07
TOP1P11387 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.13□□□□□ -2.07
TOP1P11387 AC091834.1-201ENST00000614543 472 ntBASIC2.13□□□□□ -2.07
TOP1P11387 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms