Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SUMO2P6-201ENST00000505273 288 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 AC008526.1-201ENST00000509149 338 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 MTND3P25-201ENST00000509243 135 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 RNU6-1213P-201ENST00000517075 94 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 RNU6-323P-201ENST00000521915 107 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 AL442663.2-201ENST00000554385 511 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 MIR3941-201ENST00000582572 103 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 MIR3171-201ENST00000584270 74 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC6P09630 ZNF861P-201ENST00000588126 639 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 AC023043.2-201ENST00000589678 1026 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 AC073539.2-201ENST00000597113 165 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 AC002044.1-201ENST00000606707 158 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 PART1_1.1-201ENST00000611761 217 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 AC034102.8-201ENST00000615146 484 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 CTSLP2-204ENST00000629029 392 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 Z99571.1-201ENST00000636677 394 ntBASIC3.06□□□□□ -1.92
HOXC6P09630 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXC6P09630 AL136164.4-201ENST00000625013 2135 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC6P09630 AC110774.1-201ENST00000623567 2018 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 ZNF519P1-201ENST00000449011 1626 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC6P09630 RNU6-173P-201ENST00000364215 104 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 SNORD42.2-201ENST00000365570 69 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC6P09630 Y_RNA.473-201ENST00000384333 102 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 RNY4P36-201ENST00000391116 96 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC6P09630 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC6P09630 AL591704.1-201ENST00000432574 275 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC6P09630 RPL23AP31-201ENST00000456160 467 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 AC104136.1-201ENST00000512969 394 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 SNORA9.3-201ENST00000516383 129 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.05□□□□□ -1.92
HOXC6P09630 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC6P09630 MTCO3P23-201ENST00000561363 289 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC6P09630 AC007151.1-201ENST00000572774 483 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
HOXC6P09630 AC107294.3-201ENST00000609211 526 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.05□□□□□ -1.92
HOXC6P09630 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC6P09630 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC6P09630 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC6P09630 RNU6-50P-201ENST00000362356 103 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC6P09630 DEFB109C-201ENST00000382575 264 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 DEFB109B-201ENST00000382656 264 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 RNU6-692P-201ENST00000384496 107 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 Y_RNA.534-201ENST00000384599 112 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 SNORA3.2-201ENST00000408221 125 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 RNA5SP129-201ENST00000410276 118 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 AL513331.1-201ENST00000411908 397 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 AL451074.5-201ENST00000415894 435 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC6P09630 RPL7P37-201ENST00000425095 738 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 AL360271.2-201ENST00000447710 161 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 MTCO3P10-201ENST00000455912 772 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 RPL30P15-201ENST00000457129 321 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 AC003982.1-202ENST00000469928 248 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 RPL31P60-201ENST00000478450 367 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 AC006483.1-201ENST00000487308 313 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 RPL39P5-202ENST00000512505 151 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 RNU6-1170P-201ENST00000515974 106 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 RNU6-927P-201ENST00000516199 100 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC6P09630 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC6P09630 AL360085.1-201ENST00000604713 532 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 AL080274.1-201ENST00000605565 220 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC6P09630 AL355810.1-201ENST00000614629 552 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC6P09630 AC022418.1-201ENST00000624118 445 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC6P09630 AC134503.1-201ENST00000633048 54 ntBASIC3.04□□□□□ -1.92
HOXC6P09630 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC6P09630 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
HOXC6P09630 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC6P09630 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXC6P09630 MTND4P27-201ENST00000450813 1354 ntBASIC3.03□□□□□ -1.92
HOXC6P09630 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.03□□□□□ -1.92
HOXC6P09630 MTND5P19-201ENST00000424872 1794 ntBASIC3.03□□□□□ -1.92
HOXC6P09630 DEFB108F-201ENST00000344638 222 ntBASIC3.03□□□□□ -1.92
HOXC6P09630 Y_RNA.31-201ENST00000362574 102 ntBASIC3.03□□□□□ -1.92
HOXC6P09630 RNU6-562P-201ENST00000362731 107 ntBASIC3.03□□□□□ -1.92
HOXC6P09630 Y_RNA.135-201ENST00000363439 95 ntBASIC3.03□□□□□ -1.92
HOXC6P09630 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXC6P09630 MIR181A2-201ENST00000384863 110 ntBASIC3.03□□□□□ -1.92
HOXC6P09630 MIR559-201ENST00000385188 96 ntBASIC3.03□□□□□ -1.92
HOXC6P09630 MIR548P-201ENST00000408336 84 ntBASIC3.03□□□□□ -1.92
HOXC6P09630 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC6P09630 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXC6P09630 MTND1P17-201ENST00000448961 204 ntBASIC3.03□□□□□ -1.92
HOXC6P09630 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms