Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AC012507.3-201ENST00000603556 477 ntBASIC2.4□□□□□ -2.03
VIMP08670 AL713866.2-201ENST00000603579 219 ntBASIC2.4□□□□□ -2.03
VIMP08670 NDUFA8P1-201ENST00000605525 367 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-6P-201ENST00000606623 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 AL354950.2-201ENST00000617939 290 ntBASIC2.4□□□□□ -2.03
VIMP08670 MIR5739-201ENST00000619803 80 ntBASIC2.4□□□□□ -2.03
VIMP08670 MTND5P26-201ENST00000426018 1752 ntBASIC2.4□□□□□ -2.03
VIMP08670 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VIMP08670 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
VIMP08670 MTND4P14-201ENST00000435799 1354 ntBASIC2.39□□□□□ -2.03
VIMP08670 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VIMP08670 MIR186-201ENST00000384988 86 ntBASIC2.39□□□□□ -2.03
VIMP08670 RNU2-63P-201ENST00000410792 194 ntBASIC2.39□□□□□ -2.03
VIMP08670 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.39□□□□□ -2.03
VIMP08670 RPS3AP12-201ENST00000443616 753 ntBASIC2.39□□□□□ -2.03
VIMP08670 AC073415.1-201ENST00000449240 153 ntBASIC2.39□□□□□ -2.03
VIMP08670 CKS1BP2-201ENST00000497342 240 ntBASIC2.39□□□□□ -2.03
VIMP08670 SNORA70.24-201ENST00000517233 118 ntBASIC2.39□□□□□ -2.03
VIMP08670 AL137161.1-201ENST00000532231 390 ntBASIC2.39□□□□□ -2.03
VIMP08670 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.39□□□□□ -2.03
VIMP08670 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.39□□□□□ -2.03
VIMP08670 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.39□□□□□ -2.03
VIMP08670 AGGF1P4-201ENST00000568249 801 ntBASIC2.39□□□□□ -2.03
VIMP08670 AC105137.2-201ENST00000569073 466 ntBASIC2.39□□□□□ -2.03
VIMP08670 uc_338.15-201ENST00000615470 191 ntBASIC2.39□□□□□ -2.03
VIMP08670 AC004777.1-201ENST00000624317 287 ntBASIC2.39□□□□□ -2.03
VIMP08670 AL354685.2-201ENST00000448218 1447 ntBASIC2.39□□□□□ -2.03
VIMP08670 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VIMP08670 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.38□□□□□ -2.03
VIMP08670 RNU6-529P-201ENST00000363383 104 ntBASIC2.38□□□□□ -2.03
VIMP08670 RNA5SP37-201ENST00000365420 130 ntBASIC2.38□□□□□ -2.03
VIMP08670 RNU6-259P-201ENST00000383999 107 ntBASIC2.38□□□□□ -2.03
VIMP08670 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VIMP08670 AC010975.2-201ENST00000427781 588 ntBASIC2.38□□□□□ -2.03
VIMP08670 AL606489.2-201ENST00000433886 234 ntBASIC2.38□□□□□ -2.03
VIMP08670 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.38□□□□□ -2.03
VIMP08670 RPL23AP45-201ENST00000476406 468 ntBASIC2.38□□□□□ -2.03
VIMP08670 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.38□□□□□ -2.03
VIMP08670 AL163973.1-201ENST00000484753 577 ntBASIC2.38□□□□□ -2.03
VIMP08670 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.38□□□□□ -2.03
VIMP08670 AC090255.1-201ENST00000495779 349 ntBASIC2.38□□□□□ -2.03
VIMP08670 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.38□□□□□ -2.03
VIMP08670 RNU2-53P-201ENST00000516257 147 ntBASIC2.38□□□□□ -2.03
VIMP08670 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.38□□□□□ -2.03
VIMP08670 AC109329.1-201ENST00000518744 317 ntBASIC2.38□□□□□ -2.03
VIMP08670 AC024909.2-201ENST00000553035 286 ntBASIC2.38□□□□□ -2.03
VIMP08670 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.38□□□□□ -2.03
VIMP08670 AC004223.2-201ENST00000590309 544 ntBASIC2.38□□□□□ -2.03
VIMP08670 RPL30P11-203ENST00000598995 310 ntBASIC2.38□□□□□ -2.03
VIMP08670 AC080013.6-201ENST00000606185 215 ntBASIC2.38□□□□□ -2.03
VIMP08670 AC067747.1-201ENST00000608026 250 ntBASIC2.38□□□□□ -2.03
VIMP08670 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
VIMP08670 AC139792.3-201ENST00000623525 224 ntBASIC2.38□□□□□ -2.03
VIMP08670 AP003400.5-201ENST00000624827 617 ntBASIC2.38□□□□□ -2.03
VIMP08670 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
VIMP08670 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VIMP08670 AC069528.2-201ENST00000624849 1991 ntBASIC2.38□□□□□ -2.03
VIMP08670 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VIMP08670 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VIMP08670 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.37□□□□□ -2.03
VIMP08670 OR5H15-201ENST00000383696 930 ntBASIC2.37□□□□□ -2.03
VIMP08670 RNU6-1032P-201ENST00000384100 107 ntBASIC2.37□□□□□ -2.03
VIMP08670 RNA5SP171-201ENST00000391071 115 ntBASIC2.37□□□□□ -2.03
VIMP08670 RNA5SP390-201ENST00000410191 113 ntBASIC2.37□□□□□ -2.03
VIMP08670 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VIMP08670 HMGN2P38-201ENST00000423806 265 ntBASIC2.37□□□□□ -2.03
VIMP08670 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.37□□□□□ -2.03
VIMP08670 AC105272.1-201ENST00000438604 198 ntBASIC2.37□□□□□ -2.03
VIMP08670 RNU7-180P-201ENST00000459240 63 ntBASIC2.37□□□□□ -2.03
VIMP08670 S100A11P2-201ENST00000467589 312 ntBASIC2.37□□□□□ -2.03
VIMP08670 AC117503.1-201ENST00000472241 394 ntBASIC2.37□□□□□ -2.03
VIMP08670 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.37□□□□□ -2.03
VIMP08670 RPL23AP49-201ENST00000492925 468 ntBASIC2.37□□□□□ -2.03
VIMP08670 MTND3P5-201ENST00000512798 333 ntBASIC2.37□□□□□ -2.03
VIMP08670 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.37□□□□□ -2.03
VIMP08670 RNA5SP24-201ENST00000516478 95 ntBASIC2.37□□□□□ -2.03
VIMP08670 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.37□□□□□ -2.03
VIMP08670 MTCO3P23-201ENST00000561363 289 ntBASIC2.37□□□□□ -2.03
VIMP08670 AL355297.2-201ENST00000604792 129 ntBASIC2.37□□□□□ -2.03
VIMP08670 AC123912.5-201ENST00000605470 343 ntBASIC2.37□□□□□ -2.03
VIMP08670 AC002044.1-201ENST00000606707 158 ntBASIC2.37□□□□□ -2.03
VIMP08670 AC103591.3-201ENST00000608684 209 ntBASIC2.37□□□□□ -2.03
VIMP08670 AC017083.3-201ENST00000609955 700 ntBASIC2.37□□□□□ -2.03
VIMP08670 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.37□□□□□ -2.03
VIMP08670 AC097372.5-201ENST00000623665 376 ntBASIC2.37□□□□□ -2.03
VIMP08670 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.37□□□□□ -2.03
VIMP08670 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.37□□□□□ -2.03
VIMP08670 U4.7-201ENST00000638126 106 ntBASIC2.37□□□□□ -2.03
VIMP08670 AP000553.5-201ENST00000641933 54 ntBASIC2.37□□□□□ -2.03
VIMP08670 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VIMP08670 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VIMP08670 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.36□□□□□ -2.03
VIMP08670 Y_RNA.40-201ENST00000362645 93 ntBASIC2.36□□□□□ -2.03
VIMP08670 RNU6-527P-201ENST00000363425 104 ntBASIC2.36□□□□□ -2.03
VIMP08670 Y_RNA.409-201ENST00000383990 98 ntBASIC2.36□□□□□ -2.03
VIMP08670 Y_RNA.480-201ENST00000384364 102 ntBASIC2.36□□□□□ -2.03
VIMP08670 Y_RNA.559-201ENST00000384686 107 ntBASIC2.36□□□□□ -2.03
VIMP08670 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VIMP08670 RNU2-23P-201ENST00000410545 195 ntBASIC2.36□□□□□ -2.03
VIMP08670 RNU2-16P-201ENST00000410712 136 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms