Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SNORD1A-201ENST00000364968 72 ntBASIC-0.13□□□□□ -2.43
APOBP04114 MIR224-201ENST00000384889 81 ntBASIC-0.13□□□□□ -2.43
APOBP04114 MIR644A-201ENST00000385262 94 ntBASIC-0.13□□□□□ -2.43
APOBP04114 SNORA12.1-201ENST00000390873 148 ntBASIC-0.13□□□□□ -2.43
APOBP04114 RPS15AP38-201ENST00000413110 372 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AC244098.3-201ENST00000424803 96 ntBASIC-0.13□□□□□ -2.43
APOBP04114 RN7SKP88-201ENST00000516847 250 ntBASIC-0.13□□□□□ -2.43
APOBP04114 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.13□□□□□ -2.43
APOBP04114 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.13□□□□□ -2.43
APOBP04114 BX284668.6-201ENST00000606899 438 ntBASIC-0.13□□□□□ -2.43
APOBP04114 7SK.8-201ENST00000612110 250 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AL589743.7-201ENST00000612637 233 ntBASIC-0.13□□□□□ -2.43
APOBP04114 7SK.11-201ENST00000615477 250 ntBASIC-0.13□□□□□ -2.43
APOBP04114 uc_338.34-201ENST00000617467 174 ntBASIC-0.13□□□□□ -2.43
APOBP04114 7SK.13-201ENST00000622040 250 ntBASIC-0.13□□□□□ -2.43
APOBP04114 MIR371B-201ENST00000638082 66 ntBASIC-0.13□□□□□ -2.43
APOBP04114 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.13□□□□□ -2.43
APOBP04114 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.13□□□□□ -2.43
APOBP04114 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.13□□□□□ -2.43
APOBP04114 AL714022.1-201ENST00000439897 151 ntBASIC-0.13□□□□□ -2.43
APOBP04114 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AC116337.2-201ENST00000477662 156 ntBASIC-0.13□□□□□ -2.43
APOBP04114 RNA5SP227-201ENST00000516184 113 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.13□□□□□ -2.43
APOBP04114 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.13□□□□□ -2.43
APOBP04114 AC008088.1-201ENST00000580993 280 ntBASIC-0.13□□□□□ -2.43
APOBP04114 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.13□□□□□ -2.43
APOBP04114 AC007363.1-201ENST00000604736 620 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AC105129.3-201ENST00000605455 485 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AL591926.4-201ENST00000616895 298 ntBASIC-0.13□□□□□ -2.43
APOBP04114 RNY4P6-201ENST00000363667 96 ntBASIC-0.13□□□□□ -2.43
APOBP04114 snoU13.7-201ENST00000459220 104 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AC010469.2-201ENST00000496412 480 ntBASIC-0.13□□□□□ -2.43
APOBP04114 RNU6-1282P-201ENST00000516735 96 ntBASIC-0.13□□□□□ -2.43
APOBP04114 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.13□□□□□ -2.43
APOBP04114 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.13□□□□□ -2.43
APOBP04114 AC025423.5-201ENST00000550230 219 ntBASIC-0.13□□□□□ -2.43
APOBP04114 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.13□□□□□ -2.43
APOBP04114 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.13□□□□□ -2.43
APOBP04114 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.13□□□□□ -2.43
APOBP04114 RNU6-611P-201ENST00000384276 104 ntBASIC-0.13□□□□□ -2.43
APOBP04114 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.13□□□□□ -2.43
APOBP04114 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.13□□□□□ -2.43
APOBP04114 AL441985.1-201ENST00000457727 251 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AP000797.1-201ENST00000478870 387 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-0.13□□□□□ -2.43
APOBP04114 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.13□□□□□ -2.43
APOBP04114 RNU6-798P-201ENST00000516912 103 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AC107304.1-201ENST00000604229 296 ntBASIC-0.13□□□□□ -2.43
APOBP04114 AC106858.1-201ENST00000637497 429 ntBASIC-0.13□□□□□ -2.43
APOBP04114 MIR95-201ENST00000385072 81 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.14□□□□□ -2.43
APOBP04114 DAP3P1-201ENST00000441522 278 ntBASIC-0.14□□□□□ -2.43
APOBP04114 MTND2P19-201ENST00000449129 1012 ntBASIC-0.14□□□□□ -2.43
APOBP04114 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.14□□□□□ -2.43
APOBP04114 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.14□□□□□ -2.43
APOBP04114 RNA5SP168-201ENST00000516642 112 ntBASIC-0.14□□□□□ -2.43
APOBP04114 RNU6-567P-201ENST00000516746 107 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AL513534.2-201ENST00000603836 250 ntBASIC-0.14□□□□□ -2.43
APOBP04114 Z98751.3-201ENST00000604447 521 ntBASIC-0.14□□□□□ -2.43
APOBP04114 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.14□□□□□ -2.43
APOBP04114 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.14□□□□□ -2.43
APOBP04114 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.14□□□□□ -2.43
APOBP04114 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.14□□□□□ -2.43
APOBP04114 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
APOBP04114 AC121334.2-201ENST00000605387 271 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AC090517.2-201ENST00000614966 680 ntBASIC-0.14□□□□□ -2.43
APOBP04114 uc_338.36-201ENST00000622331 158 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.14□□□□□ -2.43
APOBP04114 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.14□□□□□ -2.43
APOBP04114 AC011406.1-201ENST00000512440 370 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AC092470.1-201ENST00000546187 132 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.14□□□□□ -2.43
APOBP04114 BBIP1P1-201ENST00000602999 279 ntBASIC-0.14□□□□□ -2.43
APOBP04114 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
APOBP04114 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.14□□□□□ -2.43
APOBP04114 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.14□□□□□ -2.43
APOBP04114 AC243964.1-201ENST00000441814 261 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AC233266.1-201ENST00000454518 96 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AL049874.1-201ENST00000489560 388 ntBASIC-0.14□□□□□ -2.43
APOBP04114 SNORA70.16-201ENST00000516390 95 ntBASIC-0.14□□□□□ -2.43
APOBP04114 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AC026271.5-201ENST00000577873 130 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AC060771.1-201ENST00000582031 164 ntBASIC-0.14□□□□□ -2.43
APOBP04114 LARP7P1-201ENST00000605576 316 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AC242852.1-201ENST00000612151 96 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-0.14□□□□□ -2.43
APOBP04114 AC093913.1-201ENST00000614178 329 ntBASIC-0.14□□□□□ -2.43
APOBP04114 AC244015.1-201ENST00000622301 99 ntBASIC-0.14□□□□□ -2.43
APOBP04114 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.15□□□□□ -2.43
APOBP04114 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.15□□□□□ -2.43
APOBP04114 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.15□□□□□ -2.43
APOBP04114 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.15□□□□□ -2.43
APOBP04114 U8.21-201ENST00000459536 136 ntBASIC-0.15□□□□□ -2.43
APOBP04114 AC007751.1-201ENST00000529260 376 ntBASIC-0.15□□□□□ -2.43
APOBP04114 CASP1-212ENST00000531166 300 ntTSL 5 BASIC-0.15□□□□□ -2.43
APOBP04114 AC091805.2-201ENST00000603848 235 ntBASIC-0.15□□□□□ -2.43
APOBP04114 PART1_2.1-201ENST00000612397 250 ntBASIC-0.15□□□□□ -2.43
APOBP04114 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.15□□□□□ -2.43
APOBP04114 AC245060.5-201ENST00000610778 3293 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms