Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.03□□□□□ -2.08
MBD3O95983 AC018868.1-201ENST00000491307 315 ntBASIC2.03□□□□□ -2.08
MBD3O95983 RPL9P6-201ENST00000492764 598 ntBASIC2.03□□□□□ -2.08
MBD3O95983 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.03□□□□□ -2.08
MBD3O95983 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.03□□□□□ -2.08
MBD3O95983 SNORD27.1-201ENST00000516319 72 ntBASIC2.03□□□□□ -2.08
MBD3O95983 Y_RNA.687-201ENST00000516558 91 ntBASIC2.03□□□□□ -2.08
MBD3O95983 RNU6-1220P-201ENST00000517126 108 ntBASIC2.03□□□□□ -2.08
MBD3O95983 RNU2-19P-201ENST00000517288 84 ntBASIC2.03□□□□□ -2.08
MBD3O95983 LRRC34P1-201ENST00000542742 915 ntBASIC2.03□□□□□ -2.08
MBD3O95983 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.03□□□□□ -2.08
MBD3O95983 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.03□□□□□ -2.08
MBD3O95983 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.03□□□□□ -2.08
MBD3O95983 AC008250.2-201ENST00000615261 205 ntBASIC2.03□□□□□ -2.08
MBD3O95983 AC091304.6-201ENST00000619761 202 ntBASIC2.03□□□□□ -2.08
MBD3O95983 AL162373.1-201ENST00000620433 407 ntBASIC2.03□□□□□ -2.08
MBD3O95983 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
MBD3O95983 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
MBD3O95983 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.02□□□□□ -2.09
MBD3O95983 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
MBD3O95983 FGF7P2-201ENST00000332473 296 ntBASIC2.02□□□□□ -2.09
MBD3O95983 RNY4P34-201ENST00000364779 95 ntBASIC2.02□□□□□ -2.09
MBD3O95983 RNU6-74P-201ENST00000384235 107 ntBASIC2.02□□□□□ -2.09
MBD3O95983 Y_RNA.510-201ENST00000384511 114 ntBASIC2.02□□□□□ -2.09
MBD3O95983 SNORD116-20-201ENST00000384529 92 ntBASIC2.02□□□□□ -2.09
MBD3O95983 AL445529.1-201ENST00000398713 389 ntBASIC2.02□□□□□ -2.09
MBD3O95983 CBX3P9-201ENST00000402326 552 ntBASIC2.02□□□□□ -2.09
MBD3O95983 OR9R1P-201ENST00000412200 877 ntBASIC2.02□□□□□ -2.09
MBD3O95983 OR6C66P-201ENST00000414917 930 ntBASIC2.02□□□□□ -2.09
MBD3O95983 AL135786.1-201ENST00000415892 214 ntBASIC2.02□□□□□ -2.09
MBD3O95983 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.02□□□□□ -2.09
MBD3O95983 RPS6P15-201ENST00000431996 751 ntBASIC2.02□□□□□ -2.09
MBD3O95983 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.02□□□□□ -2.09
MBD3O95983 AC107032.1-201ENST00000485945 480 ntBASIC2.02□□□□□ -2.09
MBD3O95983 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.02□□□□□ -2.09
MBD3O95983 RNU1-86P-201ENST00000516108 154 ntBASIC2.02□□□□□ -2.09
MBD3O95983 RNU1-107P-201ENST00000516617 154 ntBASIC2.02□□□□□ -2.09
MBD3O95983 RNU6-586P-201ENST00000517265 104 ntBASIC2.02□□□□□ -2.09
MBD3O95983 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.02□□□□□ -2.09
MBD3O95983 AC034114.1-201ENST00000520293 285 ntBASIC2.02□□□□□ -2.09
MBD3O95983 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.02□□□□□ -2.09
MBD3O95983 BNIP3P6-201ENST00000549284 499 ntBASIC2.02□□□□□ -2.09
MBD3O95983 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.02□□□□□ -2.09
MBD3O95983 MIR4529-201ENST00000578110 78 ntBASIC2.02□□□□□ -2.09
MBD3O95983 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
MBD3O95983 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.02□□□□□ -2.09
MBD3O95983 MIR4435-1-201ENST00000582552 80 ntBASIC2.02□□□□□ -2.09
MBD3O95983 AC098848.2-201ENST00000588023 330 ntBASIC2.02□□□□□ -2.09
MBD3O95983 NDUFA8P1-201ENST00000605525 367 ntBASIC2.02□□□□□ -2.09
MBD3O95983 AC007494.3-201ENST00000624660 743 ntBASIC2.02□□□□□ -2.09
MBD3O95983 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
MBD3O95983 AC092881.1-201ENST00000638218 2733 ntBASIC2.02□□□□□ -2.09
MBD3O95983 AC002543.1-201ENST00000299783 1954 ntBASIC2.01□□□□□ -2.09
MBD3O95983 MT-TH-201ENST00000387441 69 ntBASIC2.01□□□□□ -2.09
MBD3O95983 MIR454-201ENST00000390180 115 ntBASIC2.01□□□□□ -2.09
MBD3O95983 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
MBD3O95983 BTF3L4P1-201ENST00000413813 468 ntBASIC2.01□□□□□ -2.09
MBD3O95983 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.01□□□□□ -2.09
MBD3O95983 TOMM20P4-201ENST00000427861 435 ntBASIC2.01□□□□□ -2.09
MBD3O95983 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.01□□□□□ -2.09
MBD3O95983 AC096638.1-201ENST00000444678 216 ntBASIC2.01□□□□□ -2.09
MBD3O95983 PMCHL2-203ENST00000457791 237 ntBASIC2.01□□□□□ -2.09
MBD3O95983 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.01□□□□□ -2.09
MBD3O95983 AC104806.1-201ENST00000508720 308 ntBASIC2.01□□□□□ -2.09
MBD3O95983 RN7SKP256-201ENST00000517201 314 ntBASIC2.01□□□□□ -2.09
MBD3O95983 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.01□□□□□ -2.09
MBD3O95983 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.01□□□□□ -2.09
MBD3O95983 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.01□□□□□ -2.09
MBD3O95983 MTCYBP33-201ENST00000575007 1130 ntBASIC2.01□□□□□ -2.09
MBD3O95983 AC008749.1-201ENST00000597650 306 ntBASIC2.01□□□□□ -2.09
MBD3O95983 AC245014.2-201ENST00000603689 287 ntBASIC2.01□□□□□ -2.09
MBD3O95983 AL670379.4-201ENST00000605279 254 ntBASIC2.01□□□□□ -2.09
MBD3O95983 AC246785.4-201ENST00000605374 287 ntBASIC2.01□□□□□ -2.09
MBD3O95983 AC087683.2-201ENST00000611384 326 ntBASIC2.01□□□□□ -2.09
MBD3O95983 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
MBD3O95983 AC022202.1-201ENST00000613515 211 ntBASIC2.01□□□□□ -2.09
MBD3O95983 MIR6852-201ENST00000621699 66 ntBASIC2.01□□□□□ -2.09
MBD3O95983 AC007792.1-201ENST00000623023 402 ntBASIC2.01□□□□□ -2.09
MBD3O95983 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.01□□□□□ -2.09
MBD3O95983 RNU6-655P-201ENST00000362858 107 ntBASIC2□□□□□ -2.09
MBD3O95983 RNU6-1210P-201ENST00000363775 107 ntBASIC2□□□□□ -2.09
MBD3O95983 Y_RNA.367-201ENST00000365544 101 ntBASIC2□□□□□ -2.09
MBD3O95983 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
MBD3O95983 HMGN2P39-201ENST00000398005 273 ntBASIC2□□□□□ -2.09
MBD3O95983 USP9YP18-201ENST00000425912 695 ntBASIC2□□□□□ -2.09
MBD3O95983 AC092447.3-201ENST00000426027 686 ntBASIC2□□□□□ -2.09
MBD3O95983 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2□□□□□ -2.09
MBD3O95983 AL121594.1-201ENST00000475906 575 ntBASIC2□□□□□ -2.09
MBD3O95983 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2□□□□□ -2.09
MBD3O95983 MTCYBP40-201ENST00000509390 1135 ntBASIC2□□□□□ -2.09
MBD3O95983 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2□□□□□ -2.09
MBD3O95983 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
MBD3O95983 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2□□□□□ -2.09
MBD3O95983 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2□□□□□ -2.09
MBD3O95983 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2□□□□□ -2.09
MBD3O95983 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2□□□□□ -2.09
MBD3O95983 AC104581.2-201ENST00000572227 430 ntBASIC2□□□□□ -2.09
MBD3O95983 MIR4775-201ENST00000581168 75 ntBASIC2□□□□□ -2.09
MBD3O95983 SNRPGP17-201ENST00000603780 214 ntBASIC2□□□□□ -2.09
MBD3O95983 AC026585.1-201ENST00000619582 524 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms