Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 USP9YP19-201ENST00000412165 485 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 AC114482.1-201ENST00000418010 247 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 AL353621.1-201ENST00000418219 243 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 SETP11-201ENST00000473027 690 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.16□□□□□ -2.43
HERC2O95714 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 SNORA31.22-201ENST00000517204 135 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC-0.16□□□□□ -2.43
HERC2O95714 AP003034.1-201ENST00000534621 422 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 HMGN2P15-201ENST00000585707 270 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 AL390208.1-201ENST00000605885 644 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC-0.16□□□□□ -2.43
HERC2O95714 AL359314.1-201ENST00000616913 261 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 AL359697.1-201ENST00000624879 587 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC-0.16□□□□□ -2.43
HERC2O95714 SNORA42.1-201ENST00000363515 137 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 SNORD114-11-201ENST00000363738 75 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 TAF9BP2-201ENST00000400856 499 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.16□□□□□ -2.43
HERC2O95714 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC-0.16□□□□□ -2.43
HERC2O95714 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC-0.16□□□□□ -2.43
HERC2O95714 RPL7P55-201ENST00000450522 746 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 RN7SKP19-201ENST00000516016 252 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 AC023157.2-201ENST00000540596 141 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC-0.16□□□□□ -2.43
HERC2O95714 AC010809.3-201ENST00000621310 641 ntBASIC-0.16□□□□□ -2.43
HERC2O95714 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 MIR593-201ENST00000384856 100 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 AL138880.1-201ENST00000405824 642 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 RPS3AP24-201ENST00000407896 734 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.16□□□□□ -2.44
HERC2O95714 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.16□□□□□ -2.44
HERC2O95714 AC104651.1-201ENST00000427559 735 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 SNRPEP9-201ENST00000436794 238 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 AL096803.2-201ENST00000450032 677 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC-0.16□□□□□ -2.44
HERC2O95714 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC-0.16□□□□□ -2.44
HERC2O95714 AC018868.1-201ENST00000491307 315 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 SMARCE1P4-201ENST00000523647 241 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 CYCSP27-201ENST00000527643 293 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 AC138869.1-201ENST00000568623 124 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 MIR3126-201ENST00000577443 74 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 MIR3616-201ENST00000584070 92 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.16□□□□□ -2.44
HERC2O95714 AL078604.3-201ENST00000615580 211 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 AC093648.1-201ENST00000623546 606 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC-0.16□□□□□ -2.44
HERC2O95714 SNORD114-12-201ENST00000365400 75 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.44
HERC2O95714 RNU6-338P-201ENST00000383888 105 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 RNU6-756P-201ENST00000383997 107 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 RNU6-925P-201ENST00000384629 104 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.16□□□□□ -2.44
HERC2O95714 EIF4EP2-201ENST00000422816 654 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC-0.16□□□□□ -2.44
HERC2O95714 SEPT7P5-201ENST00000434048 306 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 SEPT7P4-201ENST00000437076 306 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 RNF2P1-201ENST00000442955 1010 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 SNORA31.8-201ENST00000516327 108 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 SNORA27.4-201ENST00000516650 95 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 RNA5SP291-201ENST00000517222 105 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.16□□□□□ -2.44
HERC2O95714 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.16□□□□□ -2.44
HERC2O95714 AL138478.1-201ENST00000612252 832 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 MIR1246-201ENST00000636535 73 ntBASIC-0.16□□□□□ -2.44
HERC2O95714 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
HERC2O95714 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 RNU6-793P-201ENST00000384233 104 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.17□□□□□ -2.44
HERC2O95714 USP9YP29-201ENST00000445112 563 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC-0.17□□□□□ -2.44
HERC2O95714 MTCO3P2-201ENST00000457365 171 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 MTCO3P35-201ENST00000485582 781 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 HMGB1P30-201ENST00000492455 606 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
HERC2O95714 SNORD116-28-201ENST00000516123 91 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 RNU4-54P-201ENST00000516428 129 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 AC105029.1-201ENST00000520250 669 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 CIR1P1-201ENST00000524055 1133 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 AL022345.2-201ENST00000606307 135 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 AL590410.1-201ENST00000617925 333 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.17□□□□□ -2.44
HERC2O95714 AC091912.2-201ENST00000624798 167 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.17□□□□□ -2.44
HERC2O95714 AC107982.1-201ENST00000507171 1300 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 SNORD114-14-201ENST00000362723 75 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 MIR518D-201ENST00000385014 87 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 MIR605-201ENST00000385078 83 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.17□□□□□ -2.44
HERC2O95714 MTCYBP24-201ENST00000420387 1106 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 AC073261.1-201ENST00000429409 121 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.17□□□□□ -2.44
HERC2O95714 AL135790.2-201ENST00000437701 267 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.17□□□□□ -2.44
HERC2O95714 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.17□□□□□ -2.44
HERC2O95714 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms