Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MIR518D-201ENST00000385014 87 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 MIR758-201ENST00000390227 88 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 RNU2-63P-201ENST00000410792 194 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 MTATP6P19-201ENST00000413797 659 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 MTCO2P21-201ENST00000419780 677 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.64□□□□□ -2.15
NPHP4O75161 VN1R108P-201ENST00000431580 830 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 AL353706.1-201ENST00000436728 494 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.64□□□□□ -2.15
NPHP4O75161 AC026801.1-201ENST00000497178 464 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 UBE2V1P12-201ENST00000503954 474 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.64□□□□□ -2.15
NPHP4O75161 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.64□□□□□ -2.15
NPHP4O75161 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.64□□□□□ -2.15
NPHP4O75161 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.64□□□□□ -2.15
NPHP4O75161 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.64□□□□□ -2.15
NPHP4O75161 AC233702.2-202ENST00000562547 291 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 MIR3126-201ENST00000577443 74 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.64□□□□□ -2.15
NPHP4O75161 BNIP3P40-201ENST00000596017 556 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 AP001981.2-201ENST00000603241 418 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 AL360085.1-201ENST00000604713 532 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 AC211469.2-201ENST00000605461 205 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 AC006338.1-201ENST00000618453 749 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 MIR5739-201ENST00000619803 80 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 RNY4P16-201ENST00000364768 94 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 RPS20P2-201ENST00000402520 389 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 AL591034.2-201ENST00000402839 359 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 FTH1P15-201ENST00000406984 280 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.63□□□□□ -2.15
NPHP4O75161 BTF3P15-201ENST00000455606 336 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 AL441985.1-201ENST00000457727 251 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 AC093899.1-201ENST00000457984 376 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 RNU6-1132P-201ENST00000459214 107 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.63□□□□□ -2.15
NPHP4O75161 MRPS17P9-201ENST00000511924 393 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 SNORA31.16-201ENST00000516773 139 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 RNU2-19P-201ENST00000517288 84 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 AC107953.1-201ENST00000522216 297 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 AC068587.4-201ENST00000533893 186 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.63□□□□□ -2.15
NPHP4O75161 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.63□□□□□ -2.15
NPHP4O75161 AC012435.1-202ENST00000568772 240 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 MTCO2P2-201ENST00000591258 225 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 AC025165.5-201ENST00000602802 578 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 NDUFA8P1-201ENST00000605525 367 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 AC022893.3-201ENST00000607665 437 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 MTND5P42-201ENST00000637720 498 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
NPHP4O75161 AC092104.1-201ENST00000497346 1441 ntBASIC1.63□□□□□ -2.15
NPHP4O75161 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
NPHP4O75161 MIR676-201ENST00000390702 67 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 RNU6-1025P-201ENST00000410629 104 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.62□□□□□ -2.15
NPHP4O75161 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.62□□□□□ -2.15
NPHP4O75161 AL591212.2-201ENST00000433923 257 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 AL360221.1-201ENST00000445989 335 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.62□□□□□ -2.15
NPHP4O75161 AL139824.2-201ENST00000458731 1095 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 AC107032.1-201ENST00000485945 480 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 RPS23P4-201ENST00000487908 423 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.62□□□□□ -2.15
NPHP4O75161 AC114801.2-201ENST00000503825 781 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.62□□□□□ -2.15
NPHP4O75161 AC105185.1-201ENST00000518705 535 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 AC079598.5-201ENST00000547460 117 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NPHP4O75161 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.62□□□□□ -2.15
NPHP4O75161 AL713866.2-201ENST00000603579 219 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 AC107952.2-201ENST00000606048 486 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 AL355816.2-201ENST00000610049 647 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NPHP4O75161 AC138627.2-201ENST00000624202 601 ntBASIC1.62□□□□□ -2.15
NPHP4O75161 U8.3-201ENST00000363321 132 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 RNU6-166P-201ENST00000384371 107 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 Y_RNA.534-201ENST00000384599 112 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 RNU6-817P-201ENST00000391083 104 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.61□□□□□ -2.15
NPHP4O75161 AC016831.2-201ENST00000417179 352 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 AL354692.1-201ENST00000423044 315 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 AC096920.1-201ENST00000423991 241 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.61□□□□□ -2.15
NPHP4O75161 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.61□□□□□ -2.15
NPHP4O75161 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.61□□□□□ -2.15
NPHP4O75161 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.61□□□□□ -2.15
NPHP4O75161 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.61□□□□□ -2.15
NPHP4O75161 AC016691.1-201ENST00000441321 413 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 AL161788.1-201ENST00000441805 169 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.61□□□□□ -2.15
NPHP4O75161 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.61□□□□□ -2.15
NPHP4O75161 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.61□□□□□ -2.15
NPHP4O75161 MTND3P3-201ENST00000505004 126 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.61□□□□□ -2.15
NPHP4O75161 AC116347.2-201ENST00000514912 523 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 RNU6-914P-201ENST00000516749 109 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 AC107934.1-201ENST00000522215 217 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms