Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU1-112P-201ENST00000364401 164 ntBASIC2.62□□□□□ -1.99
PRKNO60260 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PRKNO60260 SNORD116-11-201ENST00000383882 92 ntBASIC2.62□□□□□ -1.99
PRKNO60260 RNU6-214P-201ENST00000384130 107 ntBASIC2.62□□□□□ -1.99
PRKNO60260 MIR34A-201ENST00000385130 110 ntBASIC2.62□□□□□ -1.99
PRKNO60260 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.62□□□□□ -1.99
PRKNO60260 AL031121.1-201ENST00000406553 254 ntBASIC2.62□□□□□ -1.99
PRKNO60260 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.62□□□□□ -1.99
PRKNO60260 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.62□□□□□ -1.99
PRKNO60260 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.62□□□□□ -1.99
PRKNO60260 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.62□□□□□ -1.99
PRKNO60260 NCOR1P3-201ENST00000420479 303 ntBASIC2.62□□□□□ -1.99
PRKNO60260 AL590632.1-201ENST00000424289 371 ntBASIC2.62□□□□□ -1.99
PRKNO60260 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.62□□□□□ -1.99
PRKNO60260 MTATP6P7-201ENST00000453315 681 ntBASIC2.62□□□□□ -1.99
PRKNO60260 AC010099.1-201ENST00000455434 375 ntBASIC2.62□□□□□ -1.99
PRKNO60260 RPS27AP10-201ENST00000496103 208 ntBASIC2.62□□□□□ -1.99
PRKNO60260 RNU6-277P-201ENST00000516272 106 ntBASIC2.62□□□□□ -1.99
PRKNO60260 RNA5SP367-201ENST00000516557 118 ntBASIC2.62□□□□□ -1.99
PRKNO60260 SNORA31.26-201ENST00000517250 137 ntBASIC2.62□□□□□ -1.99
PRKNO60260 AP005639.2-201ENST00000527592 928 ntBASIC2.62□□□□□ -1.99
PRKNO60260 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.62□□□□□ -1.99
PRKNO60260 AC107016.2-201ENST00000547968 190 ntBASIC2.62□□□□□ -1.99
PRKNO60260 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.62□□□□□ -1.99
PRKNO60260 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.62□□□□□ -1.99
PRKNO60260 GTF3AP2-201ENST00000557014 266 ntBASIC2.62□□□□□ -1.99
PRKNO60260 AL391261.3-201ENST00000557194 520 ntBASIC2.62□□□□□ -1.99
PRKNO60260 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.62□□□□□ -1.99
PRKNO60260 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.62□□□□□ -1.99
PRKNO60260 MIR4298-201ENST00000584380 73 ntBASIC2.62□□□□□ -1.99
PRKNO60260 OR1M4P-201ENST00000589199 287 ntBASIC2.62□□□□□ -1.99
PRKNO60260 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PRKNO60260 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PRKNO60260 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.62□□□□□ -1.99
PRKNO60260 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PRKNO60260 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
PRKNO60260 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PRKNO60260 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PRKNO60260 AC091564.4-201ENST00000533934 2194 ntBASIC2.61□□□□□ -1.99
PRKNO60260 ZNF519P1-201ENST00000449011 1626 ntBASIC2.61□□□□□ -1.99
PRKNO60260 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.61□□□□□ -1.99
PRKNO60260 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PRKNO60260 RPL9P7-201ENST00000330965 580 ntBASIC2.61□□□□□ -1.99
PRKNO60260 RNU6-562P-201ENST00000362731 107 ntBASIC2.61□□□□□ -1.99
PRKNO60260 Y_RNA.58-201ENST00000362807 102 ntBASIC2.61□□□□□ -1.99
PRKNO60260 Y_RNA.67-201ENST00000362870 100 ntBASIC2.61□□□□□ -1.99
PRKNO60260 Y_RNA.135-201ENST00000363439 95 ntBASIC2.61□□□□□ -1.99
PRKNO60260 RNU6-799P-201ENST00000363567 107 ntBASIC2.61□□□□□ -1.99
PRKNO60260 Y_RNA.154-201ENST00000363624 102 ntBASIC2.61□□□□□ -1.99
PRKNO60260 RNY3P1-201ENST00000365085 102 ntBASIC2.61□□□□□ -1.99
PRKNO60260 RNY3-201ENST00000365484 102 ntBASIC2.61□□□□□ -1.99
PRKNO60260 Z98749.2-208ENST00000381646 500 ntBASIC2.61□□□□□ -1.99
PRKNO60260 RNU6-128P-201ENST00000383976 107 ntBASIC2.61□□□□□ -1.99
PRKNO60260 Y_RNA.474-201ENST00000384341 102 ntBASIC2.61□□□□□ -1.99
PRKNO60260 Y_RNA.490-201ENST00000384413 102 ntBASIC2.61□□□□□ -1.99
PRKNO60260 Y_RNA.509-201ENST00000384506 99 ntBASIC2.61□□□□□ -1.99
PRKNO60260 RN7SKP58-201ENST00000411010 305 ntBASIC2.61□□□□□ -1.99
PRKNO60260 AC016831.2-201ENST00000417179 352 ntBASIC2.61□□□□□ -1.99
PRKNO60260 RPL7P37-201ENST00000425095 738 ntBASIC2.61□□□□□ -1.99
PRKNO60260 AC093151.1-201ENST00000427711 313 ntBASIC2.61□□□□□ -1.99
PRKNO60260 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.61□□□□□ -1.99
PRKNO60260 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.61□□□□□ -1.99
PRKNO60260 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.61□□□□□ -1.99
PRKNO60260 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.61□□□□□ -1.99
PRKNO60260 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.61□□□□□ -1.99
PRKNO60260 MTCO1P29-201ENST00000496868 288 ntBASIC2.61□□□□□ -1.99
PRKNO60260 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PRKNO60260 RPL39P5-202ENST00000512505 151 ntBASIC2.61□□□□□ -1.99
PRKNO60260 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.61□□□□□ -1.99
PRKNO60260 AC104576.1-201ENST00000524225 88 ntBASIC2.61□□□□□ -1.99
PRKNO60260 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PRKNO60260 AC026371.1-201ENST00000551867 419 ntBASIC2.61□□□□□ -1.99
PRKNO60260 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.61□□□□□ -1.99
PRKNO60260 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.61□□□□□ -1.99
PRKNO60260 HMGN2P15-201ENST00000585707 270 ntBASIC2.61□□□□□ -1.99
PRKNO60260 AL356055.1-201ENST00000602528 446 ntBASIC2.61□□□□□ -1.99
PRKNO60260 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.61□□□□□ -1.99
PRKNO60260 AC233263.6-201ENST00000631132 1963 ntBASIC2.61□□□□□ -1.99
PRKNO60260 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.61□□□□□ -1.99
PRKNO60260 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PRKNO60260 Y_RNA.11-201ENST00000362375 109 ntBASIC2.6□□□□□ -1.99
PRKNO60260 RNU6-898P-201ENST00000365627 104 ntBASIC2.6□□□□□ -1.99
PRKNO60260 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PRKNO60260 MIR512-1-201ENST00000384913 84 ntBASIC2.6□□□□□ -1.99
PRKNO60260 RNA5SP252-201ENST00000391131 119 ntBASIC2.6□□□□□ -1.99
PRKNO60260 MIR887-201ENST00000401258 79 ntBASIC2.6□□□□□ -1.99
PRKNO60260 MIR548K-201ENST00000408406 116 ntBASIC2.6□□□□□ -1.99
PRKNO60260 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.6□□□□□ -1.99
PRKNO60260 AC074085.1-201ENST00000413598 418 ntBASIC2.6□□□□□ -1.99
PRKNO60260 AL139396.1-201ENST00000421137 167 ntBASIC2.6□□□□□ -1.99
PRKNO60260 AC087499.2-201ENST00000432861 149 ntBASIC2.6□□□□□ -1.99
PRKNO60260 RPS29P6-201ENST00000438196 145 ntBASIC2.6□□□□□ -1.99
PRKNO60260 AC105272.1-201ENST00000438604 198 ntBASIC2.6□□□□□ -1.99
PRKNO60260 AC009969.1-201ENST00000438726 172 ntBASIC2.6□□□□□ -1.99
PRKNO60260 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.6□□□□□ -1.99
PRKNO60260 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.6□□□□□ -1.99
PRKNO60260 AC107399.1-201ENST00000451226 265 ntBASIC2.6□□□□□ -1.99
PRKNO60260 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.6□□□□□ -1.99
PRKNO60260 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.6□□□□□ -1.99
PRKNO60260 AC092436.3-201ENST00000511788 257 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms