Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC069282.1-201ENST00000411911 526 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 MTND4P3-201ENST00000417829 541 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 BTF3P4-201ENST00000418852 495 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 PGBD4P5-201ENST00000445958 426 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
PDE6DO43924 snoU109.2-201ENST00000459316 135 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 AC114982.1-201ENST00000469402 321 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 AC097473.1-201ENST00000508142 408 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 AC008837.2-201ENST00000513076 418 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.81□□□□□ -2.28
PDE6DO43924 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.81□□□□□ -2.28
PDE6DO43924 AC015688.6-201ENST00000577737 104 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
PDE6DO43924 AL159153.1-201ENST00000619688 317 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 AC007792.1-201ENST00000623023 402 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.81□□□□□ -2.28
PDE6DO43924 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
PDE6DO43924 Y_RNA.332-201ENST00000365271 113 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 RN7SKP266-201ENST00000410232 287 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 Y_RNA.623-201ENST00000411128 95 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.8□□□□□ -2.28
PDE6DO43924 AL161935.2-201ENST00000414627 60 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 EBAG9P1-201ENST00000418955 543 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AC013262.1-201ENST00000426710 252 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 CALM1P1-201ENST00000442082 433 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 PRPS1P1-201ENST00000445305 876 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 RPS27AP8-201ENST00000452665 445 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AL139824.2-201ENST00000458731 1095 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 RNA5SP269-201ENST00000459032 137 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 RNU6-677P-201ENST00000516914 101 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AP000907.2-201ENST00000530827 353 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.8□□□□□ -2.28
PDE6DO43924 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.8□□□□□ -2.28
PDE6DO43924 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.8□□□□□ -2.28
PDE6DO43924 BNIP3P33-201ENST00000598912 569 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.8□□□□□ -2.28
PDE6DO43924 AC092574.1-201ENST00000609771 420 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AC130324.3-201ENST00000614165 542 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 uc_338.12-201ENST00000616344 181 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AC092140.2-201ENST00000618027 521 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AL158163.2-201ENST00000619110 700 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 MIR8065-201ENST00000620577 100 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AC009033.1-201ENST00000624279 431 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AC099654.5-201ENST00000636479 350 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 MTND5P35-201ENST00000557537 1720 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 AC245060.5-201ENST00000610778 3293 ntBASIC0.8□□□□□ -2.28
PDE6DO43924 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
PDE6DO43924 RNU1-124P-201ENST00000363861 145 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 RNU6-621P-201ENST00000364752 109 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
PDE6DO43924 SMIM11P1-201ENST00000369586 178 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 RNU6-224P-201ENST00000384055 107 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 SNORA29-201ENST00000384183 140 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 MIR520A-201ENST00000384862 85 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 MIR548B-201ENST00000385247 97 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.79□□□□□ -2.28
PDE6DO43924 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.79□□□□□ -2.28
PDE6DO43924 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.79□□□□□ -2.28
PDE6DO43924 SNORD13-201ENST00000459299 104 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 RPL30P12-201ENST00000474666 353 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.79□□□□□ -2.28
PDE6DO43924 SNORD116-28-201ENST00000516123 91 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 RNA5SP490-201ENST00000517141 136 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 AP003355.1-201ENST00000518956 587 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 HMGB1P33-201ENST00000563485 527 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 AL355816.2-201ENST00000610049 647 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 AC013412.1-201ENST00000610687 192 ntBASIC0.79□□□□□ -2.28
PDE6DO43924 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.79□□□□□ -2.28
PDE6DO43924 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.79□□□□□ -2.28
PDE6DO43924 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
PDE6DO43924 SNORD3E-201ENST00000362899 217 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 RNU6-968P-201ENST00000384076 107 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.78□□□□□ -2.28
PDE6DO43924 AL590556.1-201ENST00000423231 483 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 MTCYBP5-201ENST00000423752 1135 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 AL627311.1-201ENST00000431514 115 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.78□□□□□ -2.28
PDE6DO43924 AC093899.1-201ENST00000457984 376 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 AC113347.3-201ENST00000509113 148 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 AC108043.1-201ENST00000512696 574 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 MTCO3P27-201ENST00000514397 196 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 RNU6-1092P-201ENST00000516955 87 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 RNA5SP437-201ENST00000517249 129 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC0.78□□□□□ -2.28
PDE6DO43924 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.78□□□□□ -2.28
PDE6DO43924 AC136932.1-201ENST00000574771 208 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 AL391001.1-201ENST00000602747 715 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 BNIP3P31-201ENST00000604515 566 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PDE6DO43924 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PDE6DO43924 RMST_4.1-201ENST00000616886 107 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 AC027335.2-201ENST00000624030 375 ntBASIC0.78□□□□□ -2.28
PDE6DO43924 MIR449A-201ENST00000362113 91 ntBASIC0.77□□□□□ -2.29
PDE6DO43924 Y_RNA.311-201ENST00000365068 96 ntBASIC0.77□□□□□ -2.29
PDE6DO43924 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
PDE6DO43924 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.77□□□□□ -2.29
PDE6DO43924 USP9YP11-201ENST00000427537 717 ntBASIC0.77□□□□□ -2.29
PDE6DO43924 AL365400.1-201ENST00000431854 640 ntBASIC0.77□□□□□ -2.29
PDE6DO43924 RPL32P28-201ENST00000443577 397 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms