Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC026801.1-201ENST00000497178 464 ntBASIC2.31□□□□□ -2.04
PHF1O43189 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.31□□□□□ -2.04
PHF1O43189 AC008716.1-201ENST00000511084 513 ntBASIC2.31□□□□□ -2.04
PHF1O43189 AC112206.3-201ENST00000514578 389 ntBASIC2.31□□□□□ -2.04
PHF1O43189 RNU6-143P-201ENST00000516942 93 ntBASIC2.31□□□□□ -2.04
PHF1O43189 DEFB122-202ENST00000569013 197 ntBASIC2.31□□□□□ -2.04
PHF1O43189 MIR548S-201ENST00000581352 82 ntBASIC2.31□□□□□ -2.04
PHF1O43189 AC018638.8-201ENST00000588755 281 ntBASIC2.31□□□□□ -2.04
PHF1O43189 AC092807.2-201ENST00000609367 243 ntBASIC2.31□□□□□ -2.04
PHF1O43189 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.31□□□□□ -2.04
PHF1O43189 MTND4P14-201ENST00000435799 1354 ntBASIC2.31□□□□□ -2.04
PHF1O43189 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.31□□□□□ -2.04
PHF1O43189 ZNF658B-202ENST00000615961 3375 ntBASIC2.3□□□□□ -2.04
PHF1O43189 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
PHF1O43189 Y_RNA.100-201ENST00000363141 102 ntBASIC2.3□□□□□ -2.04
PHF1O43189 RNA5SP68-201ENST00000363885 119 ntBASIC2.3□□□□□ -2.04
PHF1O43189 RNU1-112P-201ENST00000364401 164 ntBASIC2.3□□□□□ -2.04
PHF1O43189 Y_RNA.378-201ENST00000365652 113 ntBASIC2.3□□□□□ -2.04
PHF1O43189 RNU6-434P-201ENST00000384376 107 ntBASIC2.3□□□□□ -2.04
PHF1O43189 RNU6-45P-201ENST00000384471 107 ntBASIC2.3□□□□□ -2.04
PHF1O43189 RNU6-332P-201ENST00000391193 108 ntBASIC2.3□□□□□ -2.04
PHF1O43189 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.3□□□□□ -2.04
PHF1O43189 AL139039.1-201ENST00000401900 692 ntBASIC2.3□□□□□ -2.04
PHF1O43189 SNORA3.2-201ENST00000408221 125 ntBASIC2.3□□□□□ -2.04
PHF1O43189 RNA5SP111-201ENST00000411386 101 ntBASIC2.3□□□□□ -2.04
PHF1O43189 CYCSP33-201ENST00000414485 327 ntBASIC2.3□□□□□ -2.04
PHF1O43189 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.3□□□□□ -2.04
PHF1O43189 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.3□□□□□ -2.04
PHF1O43189 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.3□□□□□ -2.04
PHF1O43189 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.3□□□□□ -2.04
PHF1O43189 SKA2P1-201ENST00000425592 390 ntBASIC2.3□□□□□ -2.04
PHF1O43189 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.3□□□□□ -2.04
PHF1O43189 AL121601.2-201ENST00000438019 707 ntBASIC2.3□□□□□ -2.04
PHF1O43189 MTND4P18-201ENST00000447010 465 ntBASIC2.3□□□□□ -2.04
PHF1O43189 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.3□□□□□ -2.04
PHF1O43189 RPS27P26-201ENST00000494583 239 ntBASIC2.3□□□□□ -2.04
PHF1O43189 AC108210.2-201ENST00000503681 201 ntBASIC2.3□□□□□ -2.04
PHF1O43189 AC018710.1-201ENST00000506509 158 ntBASIC2.3□□□□□ -2.04
PHF1O43189 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.3□□□□□ -2.04
PHF1O43189 FAM206BP-201ENST00000510179 541 ntBASIC2.3□□□□□ -2.04
PHF1O43189 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.3□□□□□ -2.04
PHF1O43189 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.3□□□□□ -2.04
PHF1O43189 MIR3941-201ENST00000582572 103 ntBASIC2.3□□□□□ -2.04
PHF1O43189 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.3□□□□□ -2.04
PHF1O43189 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.3□□□□□ -2.04
PHF1O43189 AC090617.10-201ENST00000624308 134 ntBASIC2.3□□□□□ -2.04
PHF1O43189 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.3□□□□□ -2.04
PHF1O43189 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
PHF1O43189 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PHF1O43189 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.29□□□□□ -2.04
PHF1O43189 MIR412-201ENST00000362142 91 ntBASIC2.29□□□□□ -2.04
PHF1O43189 SET-203ENST00000372688 801 ntTSL 2 BASIC2.29□□□□□ -2.04
PHF1O43189 RNU6-166P-201ENST00000384371 107 ntBASIC2.29□□□□□ -2.04
PHF1O43189 SNORD37.1-201ENST00000390968 65 ntBASIC2.29□□□□□ -2.04
PHF1O43189 Y_RNA.604-201ENST00000410574 102 ntBASIC2.29□□□□□ -2.04
PHF1O43189 RNU6-1025P-201ENST00000410629 104 ntBASIC2.29□□□□□ -2.04
PHF1O43189 Y_RNA.615-201ENST00000410769 117 ntBASIC2.29□□□□□ -2.04
PHF1O43189 RN7SKP192-201ENST00000411291 327 ntBASIC2.29□□□□□ -2.04
PHF1O43189 POLHP1-201ENST00000411806 470 ntBASIC2.29□□□□□ -2.04
PHF1O43189 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.29□□□□□ -2.04
PHF1O43189 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.29□□□□□ -2.04
PHF1O43189 RPLP0P7-201ENST00000416050 667 ntBASIC2.29□□□□□ -2.04
PHF1O43189 RPL21P111-201ENST00000418453 477 ntBASIC2.29□□□□□ -2.04
PHF1O43189 MTCO3P46-201ENST00000425787 232 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AC098614.2-201ENST00000426040 255 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AL714022.1-201ENST00000439897 151 ntBASIC2.29□□□□□ -2.04
PHF1O43189 MTATP6P7-201ENST00000453315 681 ntBASIC2.29□□□□□ -2.04
PHF1O43189 RPL12P25-201ENST00000455592 494 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AC011005.2-201ENST00000487324 359 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AC139453.3-201ENST00000493276 369 ntBASIC2.29□□□□□ -2.04
PHF1O43189 RPS29P21-201ENST00000496272 170 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.29□□□□□ -2.04
PHF1O43189 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.29□□□□□ -2.04
PHF1O43189 AC023050.3-201ENST00000541142 333 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AL121579.1-201ENST00000555129 305 ntBASIC2.29□□□□□ -2.04
PHF1O43189 PSMA3P-201ENST00000555485 635 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AC015712.3-201ENST00000559380 164 ntBASIC2.29□□□□□ -2.04
PHF1O43189 MIR5692A1-201ENST00000580523 69 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.29□□□□□ -2.04
PHF1O43189 AC025754.2-201ENST00000606491 432 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.29□□□□□ -2.04
PHF1O43189 AL355073.2-201ENST00000612106 557 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AC022306.2-201ENST00000617563 647 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AC092794.2-201ENST00000620933 563 ntBASIC2.29□□□□□ -2.04
PHF1O43189 AL136221.1-201ENST00000621449 509 ntBASIC2.29□□□□□ -2.04
PHF1O43189 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PHF1O43189 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
PHF1O43189 AC135776.4-201ENST00000624300 1904 ntBASIC2.29□□□□□ -2.04
PHF1O43189 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PHF1O43189 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.28□□□□□ -2.04
PHF1O43189 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.28□□□□□ -2.04
PHF1O43189 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PHF1O43189 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PHF1O43189 SNORD3E-201ENST00000362899 217 ntBASIC2.28□□□□□ -2.04
PHF1O43189 Y_RNA.86-201ENST00000363020 111 ntBASIC2.28□□□□□ -2.04
PHF1O43189 Y_RNA.166-201ENST00000363730 102 ntBASIC2.28□□□□□ -2.04
PHF1O43189 SNORD14B-201ENST00000364533 90 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RNU6-384P-201ENST00000364900 104 ntBASIC2.28□□□□□ -2.04
PHF1O43189 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.28□□□□□ -2.04
PHF1O43189 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms