Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC092436.1-201ENST00000506450 503 ntBASIC1.66□□□□□ -2.14
LSM1O15116 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM1O15116 COPS8P3-201ENST00000526024 482 ntBASIC1.66□□□□□ -2.14
LSM1O15116 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.66□□□□□ -2.14
LSM1O15116 AP000889.1-201ENST00000530968 660 ntBASIC1.66□□□□□ -2.14
LSM1O15116 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.66□□□□□ -2.14
LSM1O15116 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.66□□□□□ -2.14
LSM1O15116 AC104581.2-201ENST00000572227 430 ntBASIC1.66□□□□□ -2.14
LSM1O15116 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.66□□□□□ -2.14
LSM1O15116 RMST_4.1-201ENST00000616886 107 ntBASIC1.66□□□□□ -2.14
LSM1O15116 AC090517.3-201ENST00000625170 141 ntBASIC1.66□□□□□ -2.14
LSM1O15116 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.66□□□□□ -2.14
LSM1O15116 AC092192.1-201ENST00000633154 1018 ntBASIC1.66□□□□□ -2.14
LSM1O15116 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LSM1O15116 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LSM1O15116 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
LSM1O15116 AL356292.1-201ENST00000283110 373 ntBASIC1.65□□□□□ -2.15
LSM1O15116 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LSM1O15116 RNU1-58P-201ENST00000362413 163 ntBASIC1.65□□□□□ -2.15
LSM1O15116 RNU6-501P-201ENST00000364072 100 ntBASIC1.65□□□□□ -2.15
LSM1O15116 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
LSM1O15116 SNORA24.1-201ENST00000384401 135 ntBASIC1.65□□□□□ -2.15
LSM1O15116 MIR29B2-201ENST00000385055 81 ntBASIC1.65□□□□□ -2.15
LSM1O15116 RPS3AP36-201ENST00000398190 775 ntBASIC1.65□□□□□ -2.15
LSM1O15116 RNA5SP501-201ENST00000410990 112 ntBASIC1.65□□□□□ -2.15
LSM1O15116 BTF3L4P1-201ENST00000413813 468 ntBASIC1.65□□□□□ -2.15
LSM1O15116 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.65□□□□□ -2.15
LSM1O15116 AC137499.1-201ENST00000427602 88 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AL354941.1-201ENST00000438600 464 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AL360221.1-201ENST00000445989 335 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AC245102.2-201ENST00000448956 180 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AL590365.1-201ENST00000450788 243 ntBASIC1.65□□□□□ -2.15
LSM1O15116 RPL30P1-201ENST00000488676 339 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.65□□□□□ -2.15
LSM1O15116 MTCYBP40-201ENST00000509390 1135 ntBASIC1.65□□□□□ -2.15
LSM1O15116 RPL23AP94-201ENST00000512518 302 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.65□□□□□ -2.15
LSM1O15116 MRPS36P3-201ENST00000519284 130 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM1O15116 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM1O15116 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM1O15116 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM1O15116 PCMTD1P2-201ENST00000565017 355 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AC008521.1-201ENST00000587471 187 ntBASIC1.65□□□□□ -2.15
LSM1O15116 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM1O15116 AC078795.2-201ENST00000602835 1252 ntBASIC1.65□□□□□ -2.15
LSM1O15116 WISP1-OT1-201ENST00000602893 642 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AC010900.2-201ENST00000604508 210 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AL359999.1-201ENST00000604513 294 ntBASIC1.65□□□□□ -2.15
LSM1O15116 RMST_6.1-201ENST00000611980 203 ntBASIC1.65□□□□□ -2.15
LSM1O15116 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.65□□□□□ -2.15
LSM1O15116 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM1O15116 AC006927.3-201ENST00000638789 384 ntBASIC1.65□□□□□ -2.15
LSM1O15116 AC099654.13-201ENST00000639774 207 ntBASIC1.65□□□□□ -2.15
LSM1O15116 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM1O15116 AC002543.1-201ENST00000299783 1954 ntBASIC1.65□□□□□ -2.15
LSM1O15116 RNU6-1179P-201ENST00000384667 107 ntBASIC1.64□□□□□ -2.15
LSM1O15116 MIR597-201ENST00000384968 97 ntBASIC1.64□□□□□ -2.15
LSM1O15116 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
LSM1O15116 MTND4P20-201ENST00000424125 869 ntBASIC1.64□□□□□ -2.15
LSM1O15116 AC007283.2-201ENST00000424739 197 ntBASIC1.64□□□□□ -2.15
LSM1O15116 RPS24P1-201ENST00000438550 371 ntBASIC1.64□□□□□ -2.15
LSM1O15116 AL512286.1-201ENST00000439244 400 ntBASIC1.64□□□□□ -2.15
LSM1O15116 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.64□□□□□ -2.15
LSM1O15116 AC007969.2-201ENST00000441891 191 ntBASIC1.64□□□□□ -2.15
LSM1O15116 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.64□□□□□ -2.15
LSM1O15116 FDX1P2-201ENST00000450769 375 ntBASIC1.64□□□□□ -2.15
LSM1O15116 AC012308.1-201ENST00000451232 178 ntBASIC1.64□□□□□ -2.15
LSM1O15116 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.64□□□□□ -2.15
LSM1O15116 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM1O15116 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.64□□□□□ -2.15
LSM1O15116 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.64□□□□□ -2.15
LSM1O15116 SCARNA1-201ENST00000517138 166 ntBASIC1.64□□□□□ -2.15
LSM1O15116 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM1O15116 AC004908.3-201ENST00000610248 625 ntBASIC1.64□□□□□ -2.15
LSM1O15116 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LSM1O15116 SNORD114-1-201ENST00000362705 72 ntBASIC1.63□□□□□ -2.15
LSM1O15116 RNA5SP126-201ENST00000365092 109 ntBASIC1.63□□□□□ -2.15
LSM1O15116 RNU6-61P-201ENST00000365528 109 ntBASIC1.63□□□□□ -2.15
LSM1O15116 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
LSM1O15116 RNU11-3P-201ENST00000391111 133 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AL033519.2-201ENST00000403958 392 ntBASIC1.63□□□□□ -2.15
LSM1O15116 RNU4-26P-201ENST00000410270 107 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.63□□□□□ -2.15
LSM1O15116 AL589872.1-201ENST00000426602 288 ntBASIC1.63□□□□□ -2.15
LSM1O15116 CALM2P2-201ENST00000428512 440 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AL365400.1-201ENST00000431854 640 ntBASIC1.63□□□□□ -2.15
LSM1O15116 RPS15AP10-201ENST00000432472 382 ntBASIC1.63□□□□□ -2.15
LSM1O15116 RPL7P54-201ENST00000438336 674 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AC006026.2-201ENST00000457376 180 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.63□□□□□ -2.15
LSM1O15116 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.63□□□□□ -2.15
LSM1O15116 RPL30P6-201ENST00000475925 342 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AC021146.2-201ENST00000504736 556 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AC008834.1-201ENST00000511612 175 ntBASIC1.63□□□□□ -2.15
LSM1O15116 RNU6-685P-201ENST00000517088 95 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.63□□□□□ -2.15
LSM1O15116 AC012065.4-201ENST00000602445 679 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AL136363.2-201ENST00000604173 851 ntBASIC1.63□□□□□ -2.15
LSM1O15116 AL158032.1-201ENST00000605401 106 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms