Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.22□□□□□ -2.37
CACNA1AO00555 AC092192.1-201ENST00000633154 1018 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.22□□□□□ -2.37
CACNA1AO00555 AC131280.1-202ENST00000624067 4211 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
CACNA1AO00555 Y_RNA.186-201ENST00000363899 92 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
CACNA1AO00555 RNU6-444P-201ENST00000383988 108 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CACNA1AO00555 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.21□□□□□ -2.38
CACNA1AO00555 AC009310.1-201ENST00000414414 451 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.21□□□□□ -2.38
CACNA1AO00555 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.21□□□□□ -2.38
CACNA1AO00555 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.21□□□□□ -2.38
CACNA1AO00555 RPEP5-201ENST00000441137 268 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 RNU6-953P-201ENST00000459154 107 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AL049714.1-201ENST00000466686 347 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.21□□□□□ -2.38
CACNA1AO00555 AC114811.1-201ENST00000507207 168 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 RNU6-27P-201ENST00000516146 107 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.21□□□□□ -2.38
CACNA1AO00555 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.21□□□□□ -2.38
CACNA1AO00555 HMGN2P15-201ENST00000585707 270 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 HSPE1P19-201ENST00000603327 295 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC010738.1-201ENST00000604970 987 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC100812.1-201ENST00000607622 580 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC135803.1-201ENST00000608748 565 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AL355472.4-201ENST00000610233 626 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.21□□□□□ -2.38
CACNA1AO00555 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
CACNA1AO00555 AL078604.3-201ENST00000615580 211 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 MIR5739-201ENST00000619803 80 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 MIR8065-201ENST00000620577 100 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.21□□□□□ -2.38
CACNA1AO00555 MTND2P41-201ENST00000637599 773 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 RNU1-36P-201ENST00000365130 165 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 MIR649-201ENST00000384843 97 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 MIR100-201ENST00000385259 80 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 RNU2-36P-201ENST00000410361 191 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.21□□□□□ -2.38
CACNA1AO00555 C1DP1-201ENST00000426049 402 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.21□□□□□ -2.38
CACNA1AO00555 AL157398.1-201ENST00000452981 186 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 RPS20P24-201ENST00000457473 361 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 COX6CP6-201ENST00000490840 228 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC113420.1-201ENST00000507903 571 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.21□□□□□ -2.38
CACNA1AO00555 SCARNA16.2-201ENST00000516520 172 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC067904.2-201ENST00000517322 1283 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.21□□□□□ -2.38
CACNA1AO00555 MIR4324-201ENST00000584846 72 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 RNU6-91P-201ENST00000607774 107 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 AC022202.1-201ENST00000613515 211 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 uc_338.34-201ENST00000617467 174 ntBASIC0.21□□□□□ -2.38
CACNA1AO00555 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
CACNA1AO00555 SNORD33-201ENST00000362761 85 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 Y_RNA.416-201ENST00000384014 113 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AC092047.1-201ENST00000424997 240 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AC114982.1-201ENST00000469402 321 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AL163195.1-201ENST00000496941 348 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 RNU5A-7P-201ENST00000515979 116 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.2□□□□□ -2.38
CACNA1AO00555 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.2□□□□□ -2.38
CACNA1AO00555 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.2□□□□□ -2.38
CACNA1AO00555 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AC004775.1-201ENST00000607389 753 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AL121652.1-201ENST00000608851 448 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AL359314.1-201ENST00000616913 261 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AC091925.2-201ENST00000625059 256 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CACNA1AO00555 SNORA4.1-201ENST00000364263 144 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 MIR30A-201ENST00000385092 71 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 RPL22P22-201ENST00000395439 379 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 NDUFS5P4-201ENST00000412983 318 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AL449283.1-202ENST00000418249 604 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.2□□□□□ -2.38
CACNA1AO00555 AL096803.2-201ENST00000450032 677 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.2□□□□□ -2.38
CACNA1AO00555 AC093677.1-201ENST00000514414 678 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 RNU6-902P-201ENST00000517212 91 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.2□□□□□ -2.38
CACNA1AO00555 C1DP5-201ENST00000525775 383 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.2□□□□□ -2.38
CACNA1AO00555 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.2□□□□□ -2.38
CACNA1AO00555 SNORD39.3-201ENST00000584451 71 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 BNIP3P16-201ENST00000589779 534 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AC009233.1-201ENST00000616477 371 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AC073968.1-201ENST00000618594 637 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AC099842.1-201ENST00000619919 596 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 AL590396.2-201ENST00000636511 1041 ntBASIC0.2□□□□□ -2.38
CACNA1AO00555 RNU6-486P-201ENST00000363116 107 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 MIR29C-201ENST00000385231 88 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 ZNF863P-201ENST00000426746 417 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AL590383.1-201ENST00000428602 75 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 FO393419.3-201ENST00000428741 282 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.19□□□□□ -2.38
CACNA1AO00555 MTCO1P44-201ENST00000441935 243 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms