Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.57□□□□□ -2
O00370 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
O00370 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
O00370 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
O00370 AC010329.5-201ENST00000623497 2174 ntBASIC2.56□□□□□ -2
O00370 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.56□□□□□ -2
O00370 RNU4-82P-201ENST00000362443 140 ntBASIC2.56□□□□□ -2
O00370 SNORD14B-201ENST00000364533 90 ntBASIC2.56□□□□□ -2
O00370 RNU6-1280P-201ENST00000365211 107 ntBASIC2.56□□□□□ -2
O00370 Z98749.2-208ENST00000381646 500 ntBASIC2.56□□□□□ -2
O00370 RNU1-138P-201ENST00000384093 164 ntBASIC2.56□□□□□ -2
O00370 RNU6-1127P-201ENST00000384580 107 ntBASIC2.56□□□□□ -2
O00370 SNORA67.4-201ENST00000384688 142 ntBASIC2.56□□□□□ -2
O00370 AC007064.1-201ENST00000412238 351 ntBASIC2.56□□□□□ -2
O00370 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.56□□□□□ -2
O00370 MTND1P4-201ENST00000435196 415 ntBASIC2.56□□□□□ -2
O00370 SEPT14P3-201ENST00000439401 183 ntBASIC2.56□□□□□ -2
O00370 AL161651.1-201ENST00000440882 223 ntBASIC2.56□□□□□ -2
O00370 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.56□□□□□ -2
O00370 PRPS1P1-201ENST00000445305 876 ntBASIC2.56□□□□□ -2
O00370 AL732372.2-207ENST00000445840 183 ntBASIC2.56□□□□□ -2
O00370 AC003071.1-201ENST00000451219 789 ntBASIC2.56□□□□□ -2
O00370 SEPT14P2-201ENST00000453405 183 ntBASIC2.56□□□□□ -2
O00370 HMGB1P30-201ENST00000492455 606 ntBASIC2.56□□□□□ -2
O00370 GZMAP1-201ENST00000503054 631 ntBASIC2.56□□□□□ -2
O00370 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.56□□□□□ -2
O00370 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.56□□□□□ -2
O00370 SEPT14P4-201ENST00000513445 186 ntBASIC2.56□□□□□ -2
O00370 RNU1-86P-201ENST00000516108 154 ntBASIC2.56□□□□□ -2
O00370 RNU1-107P-201ENST00000516617 154 ntBASIC2.56□□□□□ -2
O00370 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
O00370 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.56□□□□□ -2
O00370 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.56□□□□□ -2
O00370 FO082796.1-201ENST00000523795 183 ntBASIC2.56□□□□□ -2
O00370 MTND4P7-201ENST00000523876 130 ntBASIC2.56□□□□□ -2
O00370 OR5AQ1P-201ENST00000527596 927 ntBASIC2.56□□□□□ -2
O00370 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.56□□□□□ -2
O00370 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.56□□□□□ -2
O00370 PRELID2P1-201ENST00000552837 301 ntBASIC2.56□□□□□ -2
O00370 AC021739.1-201ENST00000559631 174 ntBASIC2.56□□□□□ -2
O00370 AC136619.2-201ENST00000563361 631 ntBASIC2.56□□□□□ -2
O00370 AC092325.1-201ENST00000566449 554 ntBASIC2.56□□□□□ -2
O00370 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.56□□□□□ -2
O00370 AC005261.5-201ENST00000596280 355 ntBASIC2.56□□□□□ -2
O00370 AL162413.1-201ENST00000603198 110 ntBASIC2.56□□□□□ -2
O00370 AC080078.2-201ENST00000603766 501 ntBASIC2.56□□□□□ -2
O00370 AC103810.6-201ENST00000606708 136 ntBASIC2.56□□□□□ -2
O00370 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
O00370 AC122108.2-201ENST00000611946 526 ntBASIC2.56□□□□□ -2
O00370 AP003400.5-201ENST00000624827 617 ntBASIC2.56□□□□□ -2
O00370 MIR1291-201ENST00000627649 87 ntBASIC2.56□□□□□ -2
O00370 FO624990.1-201ENST00000636373 85 ntBASIC2.56□□□□□ -2
O00370 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
O00370 Y_RNA.9-201ENST00000362354 101 ntBASIC2.55□□□□□ -2
O00370 RNU1-51P-201ENST00000365345 176 ntBASIC2.55□□□□□ -2
O00370 MIR147B-201ENST00000390185 80 ntBASIC2.55□□□□□ -2
O00370 RNU6-220P-201ENST00000390919 107 ntBASIC2.55□□□□□ -2
O00370 SNORA16.2-201ENST00000390991 127 ntBASIC2.55□□□□□ -2
O00370 FCF1P9-201ENST00000412546 282 ntBASIC2.55□□□□□ -2
O00370 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.55□□□□□ -2
O00370 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.55□□□□□ -2
O00370 AL669831.1-202ENST00000428504 417 ntBASIC2.55□□□□□ -2
O00370 AL627311.1-201ENST00000431514 115 ntBASIC2.55□□□□□ -2
O00370 MTND3P21-201ENST00000433774 331 ntBASIC2.55□□□□□ -2
O00370 GTF2IP13-201ENST00000438487 386 ntBASIC2.55□□□□□ -2
O00370 AC098831.1-201ENST00000440661 216 ntBASIC2.55□□□□□ -2
O00370 AL513328.1-201ENST00000446460 224 ntBASIC2.55□□□□□ -2
O00370 HMGN2P10-201ENST00000448085 265 ntBASIC2.55□□□□□ -2
O00370 AC074344.1-201ENST00000512823 224 ntBASIC2.55□□□□□ -2
O00370 MIR892C-201ENST00000516410 77 ntBASIC2.55□□□□□ -2
O00370 AC004944.1-201ENST00000517807 3059 ntBASIC2.55□□□□□ -2
O00370 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.55□□□□□ -2
O00370 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.55□□□□□ -2
O00370 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.55□□□□□ -2
O00370 AL137161.1-201ENST00000532231 390 ntBASIC2.55□□□□□ -2
O00370 AL512310.1-201ENST00000548639 172 ntBASIC2.55□□□□□ -2
O00370 ZNF519P2-201ENST00000557032 169 ntBASIC2.55□□□□□ -2
O00370 LINC00933-203ENST00000559812 219 ntBASIC2.55□□□□□ -2
O00370 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.55□□□□□ -2
O00370 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.55□□□□□ -2
O00370 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.55□□□□□ -2
O00370 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.55□□□□□ -2
O00370 CTSLP2-204ENST00000629029 392 ntBASIC2.55□□□□□ -2
O00370 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.55□□□□□ -2
O00370 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
O00370 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.54□□□□□ -2
O00370 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.54□□□□□ -2
O00370 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.54□□□□□ -2
O00370 Y_RNA.38-201ENST00000362617 102 ntBASIC2.54□□□□□ -2
O00370 RNU6-371P-201ENST00000364283 108 ntBASIC2.54□□□□□ -2
O00370 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
O00370 Y_RNA.402-201ENST00000383972 102 ntBASIC2.54□□□□□ -2
O00370 RNU6-434P-201ENST00000384376 107 ntBASIC2.54□□□□□ -2
O00370 Y_RNA.505-201ENST00000384489 102 ntBASIC2.54□□□□□ -2
O00370 RNA5SP219-201ENST00000390940 113 ntBASIC2.54□□□□□ -2
O00370 AL139413.1-201ENST00000421309 217 ntBASIC2.54□□□□□ -2
O00370 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.54□□□□□ -2
O00370 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.54□□□□□ -2
O00370 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.54□□□□□ -2
O00370 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms