Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK1AO00322 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK1AO00322 RNA5SP57-201ENST00000459463 123 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 MTCYBP35-201ENST00000503630 1137 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK1AO00322 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.4□□□□□ -2.19
UPK1AO00322 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.4□□□□□ -2.19
UPK1AO00322 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK1AO00322 PCMTD1P2-201ENST00000565017 355 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 AL354943.1-201ENST00000572103 781 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 BNIP3P25-201ENST00000596023 559 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 AC012065.4-201ENST00000602445 679 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 AC116312.1-201ENST00000606841 314 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.4□□□□□ -2.19
UPK1AO00322 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 RNU6-501P-201ENST00000364072 100 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 RNU6-611P-201ENST00000384276 104 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 SNORA8-201ENST00000384574 139 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 RNU11-3P-201ENST00000391111 133 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 CISD1P1-201ENST00000393907 327 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 RNU2-23P-201ENST00000410545 195 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 RN7SKP284-201ENST00000411002 343 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 VN1R36P-201ENST00000414936 291 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.39□□□□□ -2.19
UPK1AO00322 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK1AO00322 MTCO3P5-201ENST00000433620 714 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 HSPE1P21-201ENST00000438283 308 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK1AO00322 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.39□□□□□ -2.19
UPK1AO00322 HMGN2P23-201ENST00000456759 269 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 AL121594.1-201ENST00000475906 575 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.39□□□□□ -2.19
UPK1AO00322 RNU6-123P-201ENST00000516163 102 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 Y_RNA.687-201ENST00000516558 91 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK1AO00322 AC018714.1-201ENST00000605028 208 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 AL139286.2-201ENST00000606838 396 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 AC012360.2-201ENST00000609349 391 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 Z82243.1-201ENST00000609432 473 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 AC012409.4-201ENST00000612923 249 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 AC007792.1-201ENST00000623023 402 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 AC093648.1-201ENST00000623546 606 ntBASIC1.39□□□□□ -2.19
UPK1AO00322 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.39□□□□□ -2.19
UPK1AO00322 AL391994.1-201ENST00000254724 282 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
UPK1AO00322 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 RNU6-60P-201ENST00000364792 103 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 RNU6-622P-201ENST00000384272 103 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 SNORD14D-201ENST00000384390 87 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 MIR29B2-201ENST00000385055 81 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
UPK1AO00322 MIR764-201ENST00000390811 85 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 SNORD115.1-201ENST00000391109 76 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 RNA5SP212-201ENST00000391223 107 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 RPS3AP36-201ENST00000398190 775 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 CBX3P9-201ENST00000402326 552 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 RNA5SP111-201ENST00000411386 101 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 RPL22P18-201ENST00000417197 377 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 ELOCP4-201ENST00000420090 333 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK1AO00322 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK1AO00322 VN1R108P-201ENST00000431580 830 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.38□□□□□ -2.19
UPK1AO00322 MTCYBP39-201ENST00000437562 491 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 AL590365.1-201ENST00000450788 243 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 PRELID3BP1-201ENST00000457142 540 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 MTCO2P29-201ENST00000465212 189 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK1AO00322 AC010587.1-201ENST00000505809 469 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 AC108078.2-201ENST00000510750 236 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK1AO00322 AP005660.1-201ENST00000522972 293 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 AC022880.1-201ENST00000534017 973 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.38□□□□□ -2.19
UPK1AO00322 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK1AO00322 AL078605.1-201ENST00000603529 500 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 AC105129.3-201ENST00000605455 485 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 RNU6-87P-201ENST00000607561 108 ntBASIC1.38□□□□□ -2.19
UPK1AO00322 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
UPK1AO00322 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.38□□□□□ -2.19
UPK1AO00322 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
UPK1AO00322 AP000648.3-201ENST00000623539 4507 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 FARSBP1-201ENST00000435808 1778 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
UPK1AO00322 RNU5F-7P-201ENST00000363696 115 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
UPK1AO00322 RNU6-641P-201ENST00000384006 107 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 SNORA67.5-201ENST00000391036 107 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 BTF3L4P2-201ENST00000392798 346 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 RNA5SP390-201ENST00000410191 113 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK1AO00322 AL513185.2-201ENST00000425543 193 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
UPK1AO00322 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK1AO00322 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms