Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 EIF4EP3-201ENST00000498782 656 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC022447.1-201ENST00000515358 464 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AP004607.1-201ENST00000524456 203 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC023050.2-201ENST00000544968 387 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC068338.1-201ENST00000565567 176 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 MIR3167-201ENST00000579623 85 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 MIR4307-201ENST00000582802 84 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC012065.4-201ENST00000602445 679 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC174048.1-201ENST00000603389 144 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL022154.1-201ENST00000604698 785 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC013476.2-201ENST00000614456 459 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC007792.1-201ENST00000623023 402 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC106754.1-201ENST00000562632 1513 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 RNU6-1167P-201ENST00000363227 94 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 RNU4-1-201ENST00000363925 141 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 RNU6-1035P-201ENST00000384477 107 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC023141.4-201ENST00000412031 328 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL356379.1-201ENST00000414105 126 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL353777.1-201ENST00000425552 326 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 USP9YP18-201ENST00000425912 695 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL627311.1-201ENST00000431514 115 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL117351.1-201ENST00000438864 766 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL592447.1-201ENST00000447592 540 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 PSPHP1-201ENST00000450062 261 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 RPS27P21-201ENST00000486977 252 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC023141.11-201ENST00000508864 202 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC109329.1-201ENST00000518744 317 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC145350.1-201ENST00000567426 208 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 MIR3915-201ENST00000578518 97 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL050303.3-201ENST00000613704 284 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 MTND5P33-201ENST00000571250 1450 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 CR848007.1-201ENST00000442354 1699 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RNU6-858P-201ENST00000362436 107 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 Y_RNA.294-201ENST00000364916 102 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RNA5SP240-201ENST00000365355 128 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RNU6-140P-201ENST00000384566 108 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RPS3AP36-201ENST00000398190 775 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RNU2-3P-201ENST00000410144 191 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RN7SKP51-201ENST00000410781 304 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 AC078974.1-201ENST00000411597 223 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 AL008987.1-201ENST00000415528 237 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 AC137499.1-201ENST00000427602 88 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 AC092573.2-201ENST00000434546 243 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RPL23AP35-201ENST00000451906 501 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 AC013267.1-201ENST00000458227 267 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RNU6-390P-201ENST00000516259 103 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 Y_RNA.689-201ENST00000516589 107 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RNU6-928P-201ENST00000516876 104 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 SNORA31.19-201ENST00000517079 126 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RNU6-1315P-201ENST00000517187 99 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 MIR3122-201ENST00000577243 73 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 MIR4760-201ENST00000585040 80 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 AC012409.4-201ENST00000612923 249 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 AC010329.5-201ENST00000623497 2174 ntBASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
COL6A6A6NMZ7 RNU6-17P-201ENST00000384245 107 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 RNU6-18P-201ENST00000384527 107 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 RPS20P2-201ENST00000402520 389 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 TXNL1P1-201ENST00000429528 554 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC098934.3-201ENST00000430450 190 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 LARP1BP3-201ENST00000437229 869 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 MTND1P30-201ENST00000441241 901 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 GAPDHP17-201ENST00000449858 1001 ntBASIC0.92□□□□□ -2.26
COL6A6A6NMZ7 ATG12P2-201ENST00000456830 416 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms