Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 CECR9-201ENST00000453421 199 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 HMGB1P30-201ENST00000492455 606 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 AC010460.2-201ENST00000509054 677 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 AC093259.1-201ENST00000509755 300 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 MTCYBP43-201ENST00000513621 740 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 ACA59.2-201ENST00000517061 156 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 RNA5SP290-201ENST00000517133 127 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 AC018630.3-201ENST00000542637 96 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 AC136619.2-201ENST00000563361 631 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 MIR5094-201ENST00000578766 85 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 MIR4431-201ENST00000579990 94 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 AC002545.1-201ENST00000592511 181 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 BNIP3P8-201ENST00000597863 560 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 AC009032.1-201ENST00000617574 431 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 MTCO1P18-201ENST00000455518 1419 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 U3.9-201ENST00000363823 204 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 SNORD114-6-201ENST00000364393 72 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 RNU1-39P-201ENST00000383897 165 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 RNU6-969P-201ENST00000383900 105 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 RNU6-160P-201ENST00000384591 107 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 MIR942-201ENST00000401111 86 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AL590556.1-201ENST00000423231 483 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AC010153.1-201ENST00000432862 727 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AC073614.1-201ENST00000438690 650 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 MTCO3P18-201ENST00000440206 761 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 MTCYBP40-201ENST00000509390 1135 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 MTCO3P7-201ENST00000510008 774 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 SNORD79.1-201ENST00000516069 84 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AL356057.1-201ENST00000533798 831 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AC027104.1-201ENST00000563702 681 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AC068790.6-201ENST00000602558 258 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 GAS5-AS1-201ENST00000602767 694 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AL020997.3-201ENST00000602843 359 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AC107304.1-201ENST00000604229 296 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AP000654.2-201ENST00000605633 586 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AC092354.1-201ENST00000606057 376 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AC092106.3-201ENST00000611308 722 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AL118556.2-201ENST00000614375 824 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 AC018926.1-201ENST00000616335 435 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 MIR6515-201ENST00000619843 57 ntBASIC0.01□□□□□ -2.41
CPSF4LA6NMK7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 Y_RNA.116-201ENST00000363292 103 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 RNU6-944P-201ENST00000364023 107 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 RNU6-658P-201ENST00000384606 106 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 RAB28P5-201ENST00000427490 651 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 FTH1P25-201ENST00000447665 469 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 RNA5SP269-201ENST00000459032 137 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 SNORA31.2-201ENST00000516019 134 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 MIR4514-201ENST00000581410 57 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 AL355598.1-201ENST00000604169 202 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 RNU6-91P-201ENST00000607774 107 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 AC009269.6-201ENST00000621778 588 ntBASIC0□□□□□ -2.41
CPSF4LA6NMK7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0□□□□□ -2.41
CPSF4LA6NMK7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AC090625.1-201ENST00000357130 210 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AL592310.1-201ENST00000414330 671 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 RPL22P18-201ENST00000417197 377 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AC002381.1-201ENST00000447049 280 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AC092989.1-201ENST00000481235 277 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AC010587.2-201ENST00000511727 448 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 RNU6-965P-201ENST00000516721 96 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 LARP7P2-201ENST00000575306 125 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 VN1R88P-201ENST00000596787 292 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AC112220.2-201ENST00000605513 533 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AC107952.2-201ENST00000606048 486 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.01□□□□□ -2.41
CPSF4LA6NMK7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms