Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC009318.2-201ENST00000610917 651 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC119674.1-207ENST00000641355 633 ntBASIC3.78□□□□□ -1.8
CCDC163A0A0D9SF12 AC010889.1-201ENST00000566193 2666 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 RBBP8P1-201ENST00000449447 1844 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 Y_RNA.80-201ENST00000362996 102 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 Y_RNA.485-201ENST00000384395 102 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 MIR147B-201ENST00000390185 80 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 MIR767-201ENST00000390228 109 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 RNA5SP354-201ENST00000391247 136 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 MRPL42P3-201ENST00000401492 326 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 Y_RNA.605-201ENST00000410577 105 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AC245291.1-201ENST00000419501 328 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 RBMY2UP-201ENST00000453474 324 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AL441985.1-201ENST00000457727 251 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 RN7SL585P-201ENST00000470538 280 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AC021146.2-201ENST00000504736 556 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AC022695.1-201ENST00000522089 237 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 MRPS36P4-201ENST00000534436 298 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AC007375.1-201ENST00000554513 578 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AC025281.1-201ENST00000567026 265 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 MIR5696-201ENST00000578474 85 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AC116312.1-201ENST00000606841 314 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 AL355802.3-201ENST00000607571 545 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC163A0A0D9SF12 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 ZNF72P-201ENST00000425869 1908 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 SNORA63C-201ENST00000364578 129 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 RNU6-1032P-201ENST00000384100 107 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 Y_RNA.459-201ENST00000384251 102 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 Y_RNA.504-201ENST00000384481 104 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC113618.1-201ENST00000416747 285 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC138623.1-201ENST00000418060 216 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC091874.1-201ENST00000511402 339 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 RN7SKP57-201ENST00000517248 293 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 HSBP1P1-201ENST00000555205 166 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC091152.3-201ENST00000604227 325 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 MIR4727-201ENST00000622232 55 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 MAPK10-322ENST00000641485 4530 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC058791.1-201ENST00000608412 3198 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 AC233981.2-201ENST00000611524 1614 ntBASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CCDC163A0A0D9SF12 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 RNU6-595P-201ENST00000363944 107 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 RNU1-33P-201ENST00000364249 162 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 RNU6-968P-201ENST00000384076 107 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 RNU6-784P-201ENST00000384330 106 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 RNU6-843P-201ENST00000384454 104 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 RNU6-738P-201ENST00000384531 106 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 Y_RNA.577-201ENST00000384794 101 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 RNU6-1140P-201ENST00000410517 106 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 RNA5SP494-201ENST00000410653 129 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 AC007098.1-201ENST00000420122 367 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 AC007969.2-201ENST00000441891 191 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 OR2AQ1P-201ENST00000451972 200 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 RPS29P12-201ENST00000460178 152 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 GZMAP1-201ENST00000503054 631 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 AC097462.2-201ENST00000504623 481 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 IGKV2-38-201ENST00000517443 247 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 HSPE1P4-201ENST00000550617 308 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 AC004584.2-201ENST00000570407 410 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 MTND6P33-201ENST00000571794 183 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
CCDC163A0A0D9SF12 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms