Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AL136520.1-202ENST00000555494 763 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 MIR1273C-201ENST00000578669 77 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 VN1R83P-201ENST00000595685 445 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 BNIP3P26-201ENST00000600827 554 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 BNIP3P30-201ENST00000601184 574 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AL365204.3-201ENST00000612448 685 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AL136313.1-201ENST00000624804 202 ntBASIC0.84□□□□□ -2.27
TRAV3A0A0B4J244 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.84□□□□□ -2.28
TRAV3A0A0B4J244 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.84□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-560P-201ENST00000364007 108 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 SNORA4.3-201ENST00000365564 137 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-701P-201ENST00000384059 107 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 MIR499A-201ENST00000384903 122 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 MIR618-201ENST00000385287 98 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 NCOR1P3-201ENST00000420479 303 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AL669831.1-202ENST00000428504 417 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 CBX3P6-201ENST00000430257 527 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 USP9YP35-201ENST00000435696 412 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 CR769776.1-201ENST00000441254 787 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 MTND2P4-201ENST00000445034 1004 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 GDI2P2-201ENST00000445131 608 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AL606517.1-201ENST00000446914 387 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AC079448.1-201ENST00000449377 373 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AL157871.3-201ENST00000557231 293 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AC019288.1-201ENST00000557918 224 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AC009269.6-201ENST00000621778 588 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AC022513.1-201ENST00000624512 117 ntBASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV3A0A0B4J244 AC233981.2-201ENST00000611524 1614 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-112P-201ENST00000363599 104 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 RNU5A-8P-201ENST00000364102 114 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 SNORA75B-201ENST00000384053 137 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 RNA5SP390-201ENST00000410191 113 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AC016831.2-201ENST00000417179 352 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AC138623.1-201ENST00000418060 216 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 RAC1P6-201ENST00000423911 575 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 RPS27P16-201ENST00000425758 201 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 UBE2V1P8-201ENST00000437166 265 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AC027119.1-201ENST00000440877 241 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AL022238.1-201ENST00000442557 355 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 HMGN2P18-201ENST00000450680 270 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 RPL30P6-201ENST00000475925 342 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AC132942.1-201ENST00000486753 483 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 HMGN1P7-201ENST00000491722 313 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 MIR4295-201ENST00000585286 85 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AC005786.1-201ENST00000588553 154 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AC012065.4-201ENST00000602445 679 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 MTATP6P2-201ENST00000603319 678 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AC174048.1-201ENST00000603389 144 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AC004908.3-201ENST00000610248 625 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AL512506.1-201ENST00000613918 449 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AL158163.2-201ENST00000619110 700 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AL159153.1-201ENST00000619688 317 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 AC008993.2-201ENST00000631744 806 ntBASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV3A0A0B4J244 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 RNA5SP493-201ENST00000364115 91 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 SNORA62.1-201ENST00000364287 154 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 SNORD1A-201ENST00000364968 72 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 Y_RNA.311-201ENST00000365068 96 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 SNORA22-201ENST00000383907 134 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-160P-201ENST00000384591 107 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-296P-201ENST00000384608 107 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 SNORA22C-201ENST00000384614 134 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-1025P-201ENST00000410629 104 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 UBE2V1P10-201ENST00000414685 269 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 RPL21P90-201ENST00000415692 466 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AC013262.1-201ENST00000426710 252 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 TAF9P1-201ENST00000445421 515 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 NDUFB1P2-201ENST00000449477 176 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 TAF9P2-201ENST00000454958 515 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 RPL26P26-201ENST00000480251 434 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AC108078.1-201ENST00000508073 725 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 RNA5SP216-201ENST00000516111 123 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AC087894.1-201ENST00000538359 518 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AC092325.1-201ENST00000566449 554 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AC008507.2-201ENST00000588402 1176 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 BNIP3P8-201ENST00000597863 560 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AC006270.3-201ENST00000605967 1036 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms