Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 AC018926.1-201ENST00000616335 435 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 Y_RNA.224-201ENST00000364308 111 ntBASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 AC092423.1-201ENST00000430165 186 ntBASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 MTND2P5-201ENST00000432656 1006 ntBASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 AC002429.1-201ENST00000437672 148 ntBASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 SNORA31.4-201ENST00000516049 129 ntBASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6-416P-201ENST00000516265 103 ntBASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6-965P-201ENST00000516721 96 ntBASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 AC011451.2-201ENST00000604303 598 ntBASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 AC010133.1-201ENST00000615809 842 ntBASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 AC004009.2-201ENST00000623016 728 ntBASIC0.14□□□□□ -2.39
TRAV30A0A087WSZ9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 VN1R42P-201ENST00000424651 344 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 RNA5SP255-201ENST00000516370 107 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 RNU5A-4P-201ENST00000516588 111 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6-405P-201ENST00000516637 110 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6-467P-201ENST00000517027 110 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 RNA5SP490-201ENST00000517141 136 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6-889P-201ENST00000517189 103 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 APOOP3-201ENST00000536787 586 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 AC018630.3-201ENST00000542637 96 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 MIR3124-201ENST00000582636 67 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 AC009269.6-201ENST00000621778 588 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 AC022513.1-201ENST00000624512 117 ntBASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
TRAV30A0A087WSZ9 RNU4-79P-201ENST00000362764 141 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 BTF3L4P3-201ENST00000418879 476 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 AC104651.1-201ENST00000427559 735 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 AC010153.1-201ENST00000432862 727 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 OR6C5P-201ENST00000452388 923 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 AC008628.1-201ENST00000508663 265 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 AC104806.1-201ENST00000508720 308 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 AL590705.4-201ENST00000532209 134 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 LARP7P2-201ENST00000575306 125 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 AC017083.3-201ENST00000609955 700 ntBASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV30A0A087WSZ9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6-349P-201ENST00000362402 107 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6-910P-201ENST00000390844 107 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 RNA5SP193-201ENST00000410353 107 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 RPS20P10-201ENST00000451209 253 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 SNRPGP9-201ENST00000456025 225 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 MTCO1P31-201ENST00000506355 492 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 RNA5SP481-201ENST00000516814 122 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 AC087854.1-201ENST00000519706 414 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 AL353997.4-201ENST00000586196 166 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 BNIP3P31-201ENST00000604515 566 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 RMST_4.1-201ENST00000616886 107 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 Z69720.2-201ENST00000624755 279 ntBASIC0.11□□□□□ -2.39
TRAV30A0A087WSZ9 AC027514.1-201ENST00000588561 1603 ntBASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 MIR194-1-201ENST00000384892 85 ntBASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 AL050341.1-201ENST00000447743 313 ntBASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 RN7SKP256-201ENST00000517201 314 ntBASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 BNIP3P24-201ENST00000593398 557 ntBASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 AC006270.3-201ENST00000605967 1036 ntBASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 AL118556.2-201ENST00000614375 824 ntBASIC0.1□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6-1237P-201ENST00000384777 107 ntBASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 RPL36AP53-201ENST00000432891 316 ntBASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 RPS27AP8-201ENST00000452665 445 ntBASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 RNU6-165P-201ENST00000517170 99 ntBASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 AC069114.2-201ENST00000604699 304 ntBASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 AL138726.1-201ENST00000614873 333 ntBASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 AC120349.3-201ENST00000624377 529 ntBASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 AC245060.5-201ENST00000610778 3293 ntBASIC0.09□□□□□ -2.4
TRAV30A0A087WSZ9 U3.9-201ENST00000363823 204 ntBASIC0.08□□□□□ -2.4
TRAV30A0A087WSZ9 RNU6-944P-201ENST00000364023 107 ntBASIC0.08□□□□□ -2.4
TRAV30A0A087WSZ9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms