Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SNORD116-29-201ENST00000384516 83 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 MIR181B1-201ENST00000385240 110 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 RNA5SP492-201ENST00000411330 114 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 NCOR1P3-201ENST00000420479 303 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AL583843.1-201ENST00000456070 346 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AC117440.1-201ENST00000474107 571 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 MIR892C-201ENST00000516410 77 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 RNA5SP291-201ENST00000517222 105 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 SNORA70.24-201ENST00000517233 118 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 HSPE1P20-201ENST00000538133 289 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 CYCSP39-201ENST00000565821 309 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 MTCO3P13-201ENST00000577757 781 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AC010620.2-201ENST00000600135 313 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AL161431.1-201ENST00000618966 4205 ntBASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MRPS28Q9Y2Q9 AC010680.1-201ENST00000590024 3590 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 SNORA70.4-201ENST00000365509 134 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 RNU6-1013P-201ENST00000384180 107 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 MIR181A2-201ENST00000384863 110 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 FO393413.1-201ENST00000402892 195 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 SNORA11.1-201ENST00000408133 129 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 MIR548F5-201ENST00000408421 86 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 RNU2-68P-201ENST00000410878 191 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 Y_RNA.623-201ENST00000411128 95 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AL513477.1-202ENST00000417061 214 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AL590632.1-201ENST00000424289 371 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC005300.1-201ENST00000428401 373 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 HMGB1P9-201ENST00000429856 646 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 RPS29P6-201ENST00000438196 145 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 Y_RNA.632-201ENST00000459189 102 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC092436.3-201ENST00000511788 257 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 SNORA31.19-201ENST00000517079 126 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC100830.2-201ENST00000581636 240 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC008739.2-201ENST00000597006 317 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC012468.1-201ENST00000604888 430 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC016727.1-205ENST00000605437 569 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC107871.2-201ENST00000612894 502 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC098657.3-201ENST00000620434 263 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AL359757.2-201ENST00000624309 274 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 AC110079.1-202ENST00000635213 138 ntBASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MRPS28Q9Y2Q9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 AC022336.2-201ENST00000568966 2538 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 Y_RNA.67-201ENST00000362870 100 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 SNORA9.2-201ENST00000365361 133 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 RNU6-1035P-201ENST00000384477 107 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 RNU6-95P-201ENST00000384697 107 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 MIR518D-201ENST00000385014 87 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 AC098614.2-201ENST00000426040 255 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 MTND1P14-201ENST00000427400 950 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 RPL23AP83-201ENST00000434984 473 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 FABP5P14-201ENST00000437273 393 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 AL359672.1-201ENST00000442302 409 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 RNU7-138P-201ENST00000459479 64 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 Y_RNA.675-201ENST00000516389 149 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 RNU6-1332P-201ENST00000516666 104 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 RNU6-572P-201ENST00000516724 80 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 RNU6-928P-201ENST00000516876 104 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 RNU6-273P-201ENST00000516937 96 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 SNORA31.21-201ENST00000517180 77 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 AC087854.1-201ENST00000519706 414 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 RNU6-323P-201ENST00000521915 107 ntBASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
MRPS28Q9Y2Q9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms