Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC011155.2-201ENST00000623202 216 ntBASIC1.87□□□□□ -2.11
TRAPPC4Q9Y296 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AL390237.1-201ENST00000404226 1415 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 RNU6-181P-201ENST00000363225 107 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 SNORD116-9-201ENST00000384000 95 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 SNORD116-3-201ENST00000384287 95 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 SNORD116-7-201ENST00000384404 95 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 SNORD116-5-201ENST00000384462 95 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 MIR1-2-201ENST00000384961 85 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC016831.2-201ENST00000417179 352 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 MTCO1P19-201ENST00000443487 500 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC080013.2-201ENST00000460866 323 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC010424.1-201ENST00000506336 297 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 RPL23AP94-201ENST00000512518 302 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 RNU6-445P-201ENST00000516949 107 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 IGKV3-31-201ENST00000523109 329 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 OR5AL2P-201ENST00000532185 920 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AL138976.2-201ENST00000563989 694 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC010620.1-201ENST00000601088 1102 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 RNU6-91P-201ENST00000607774 107 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC244517.12-201ENST00000623581 663 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC009161.2-201ENST00000624626 138 ntBASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAPPC4Q9Y296 RNU6-942P-201ENST00000363002 107 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 RNU6-384P-201ENST00000364900 104 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 RNU4-48P-201ENST00000365559 182 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 RNU6-72P-201ENST00000384285 79 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 SNORA64-201ENST00000384674 134 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 FTH1P15-201ENST00000406984 280 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 U6atac.2-201ENST00000408644 118 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 RN7SKP32-201ENST00000410167 303 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 OR6C66P-201ENST00000414917 930 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AL353621.1-201ENST00000418219 243 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 RPL30P4-201ENST00000429309 333 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 MTCO2P11-201ENST00000431069 680 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AL445646.1-201ENST00000431784 216 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 MTCO2P16-201ENST00000436962 677 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 MTND4P32-201ENST00000437189 1237 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 FABP5P14-201ENST00000437273 393 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC132479.1-201ENST00000449160 144 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 C1DP4-201ENST00000455429 424 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC022364.2-201ENST00000457963 554 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 RPL7P43-201ENST00000478876 753 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 RPS27P21-201ENST00000486977 252 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC018437.1-201ENST00000492214 406 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC104806.1-201ENST00000508720 308 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC117532.1-201ENST00000514638 323 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC025678.1-201ENST00000567861 338 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 MIR5571-201ENST00000577998 113 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AP005136.1-201ENST00000579765 429 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 MIR3199-1-201ENST00000582434 88 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 MIR4765-201ENST00000585007 77 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 RSL24D1P11-201ENST00000591045 491 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC119751.7-201ENST00000600494 245 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AL670379.10-201ENST00000604330 253 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AL670379.4-201ENST00000605279 254 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AL670379.9-201ENST00000605428 253 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AL021997.1-201ENST00000605757 193 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC098614.4-201ENST00000607601 462 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 RMST_4.1-201ENST00000616886 107 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 U6.42-201ENST00000618440 107 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 AC092656.1-203ENST00000624134 423 ntBASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
TRAPPC4Q9Y296 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 RNU6-486P-201ENST00000363116 107 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 SNORA62.1-201ENST00000364287 154 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 SNORD116-1-201ENST00000384335 95 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 RNU6-1179P-201ENST00000384667 107 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 MIR10A-201ENST00000385043 110 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 RNU6-550P-201ENST00000391057 101 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 RNA5SP111-201ENST00000411386 101 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms