Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AL022154.1-201ENST00000604698 785 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC013244.3-201ENST00000605614 388 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC006338.1-201ENST00000618453 749 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AP000484.1-201ENST00000620067 1252 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC024940.5-201ENST00000622889 474 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC093648.1-201ENST00000623546 606 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 HAUS6P2-201ENST00000433254 2404 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 MIR424-201ENST00000362227 98 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 RNU1-58P-201ENST00000362413 163 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 RNY4P16-201ENST00000364768 94 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 CBX3P9-201ENST00000402326 552 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 USP9YP18-201ENST00000425912 695 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AL354695.1-201ENST00000427935 228 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AL008629.1-201ENST00000438615 184 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 HMGB1P18-201ENST00000438801 619 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 PTENP1-201ENST00000447117 1215 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 EXOSC3P1-201ENST00000448649 500 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AL353752.1-201ENST00000454946 260 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 USP9YP25-201ENST00000457708 443 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AC021146.2-201ENST00000504736 556 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 HSPE1P23-201ENST00000509838 286 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 SNORA44.1-201ENST00000517031 108 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 COPS8P3-201ENST00000526024 482 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AP003122.4-201ENST00000530980 758 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AC015720.1-201ENST00000565251 277 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AC078795.2-201ENST00000602835 1252 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AC010900.2-201ENST00000604508 210 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AL139022.2-201ENST00000606934 443 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 AC021755.4-201ENST00000616620 456 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 FRG1KP-201ENST00000623592 341 ntBASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HHLA3Q9XRX5 U8.1-201ENST00000362843 134 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 RNU1-17P-201ENST00000363022 152 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 RNU6-1210P-201ENST00000363775 107 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 RNU6-743P-201ENST00000364151 106 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 RNU6-338P-201ENST00000383888 105 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 SNORD116-20-201ENST00000384529 92 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 RNU2-23P-201ENST00000410545 195 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 SRIP3-201ENST00000413200 219 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC104058.1-201ENST00000448028 297 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC245102.2-201ENST00000448956 180 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC012308.1-201ENST00000451232 178 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 snoU13.23-201ENST00000458863 104 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC108210.2-201ENST00000503681 201 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 FAM206BP-201ENST00000510179 541 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC112206.3-201ENST00000514578 389 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 RNU6-1003P-201ENST00000517099 105 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 RN7SKP256-201ENST00000517201 314 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC018630.3-201ENST00000542637 96 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC015712.3-201ENST00000559380 164 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC012065.4-201ENST00000602445 679 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 PRR13P7-201ENST00000605538 430 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 AC144521.1-201ENST00000607148 956 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 U1.36-201ENST00000620684 176 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.03□□□□□ -2.24
HHLA3Q9XRX5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
HHLA3Q9XRX5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 MIR412-201ENST00000362142 91 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 SNORD14B-201ENST00000364533 90 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 MIR10A-201ENST00000385043 110 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 BTF3L4P2-201ENST00000392798 346 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 MIR1323-201ENST00000408090 73 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 RNA5SP100-201ENST00000410903 110 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 RNA5SP59-201ENST00000410922 110 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 AL353777.1-201ENST00000425552 326 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 SDAD1P3-201ENST00000427380 333 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 AL627311.1-201ENST00000431514 115 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 RPL23AP30-201ENST00000432419 501 ntBASIC1.02□□□□□ -2.25
HHLA3Q9XRX5 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms