Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 OR4G2P-202ENST00000641004 1759 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 RNU6-306P-201ENST00000384617 107 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 MT-TC-201ENST00000387405 66 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 AC004866.2-201ENST00000438285 481 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 snoU109.4-201ENST00000458953 143 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 RPL21P93-201ENST00000480465 489 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 AC135721.1-201ENST00000497954 479 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 Y_RNA.662-201ENST00000516028 97 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 AC022790.1-201ENST00000522872 204 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 MRPS36P4-201ENST00000534436 298 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 SUB1P3-201ENST00000564581 315 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 AC091895.1-201ENST00000624494 256 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 ZNF33CP-201ENST00000432492 2030 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 AC103710.2-202ENST00000641454 2853 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 AC008669.1-201ENST00000565823 2178 ntBASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
COL17A1Q9UMD9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.96□□□□□ -1.61
COL17A1Q9UMD9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
COL17A1Q9UMD9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
COL17A1Q9UMD9 RNU6-1059P-201ENST00000363752 98 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 RNU6-47P-201ENST00000383866 107 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 SNORA41-201ENST00000384675 132 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 RNU6-394P-201ENST00000410735 107 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 EEF1A1P41-201ENST00000414667 207 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 BMS1P22-201ENST00000414726 313 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 AL603825.1-201ENST00000438481 80 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 AC114982.1-201ENST00000469402 321 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 AC108078.2-201ENST00000510750 236 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 SERF1AP1-201ENST00000514575 187 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 AC100870.1-201ENST00000522035 505 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 AL355877.2-201ENST00000603670 358 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 AL391516.1-201ENST00000554380 2449 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 CEP170P1-201ENST00000502249 4587 ntBASIC4.96□□□□□ -1.62
COL17A1Q9UMD9 Y_RNA.273-201ENST00000364703 102 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 RNU4-42P-201ENST00000364738 142 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 Y_RNA.471-201ENST00000384312 102 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 RNU6-146P-201ENST00000384602 108 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 AC114491.1-201ENST00000416095 246 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 SNORD5.1-201ENST00000458800 75 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 SNORA31.6-201ENST00000516241 130 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 DEFB108D-201ENST00000527787 222 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 AL138889.2-201ENST00000603883 242 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 AL670379.4-201ENST00000605279 254 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 AC006329.2-201ENST00000611491 394 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 MIR4496-201ENST00000635896 61 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 HAUS6P2-201ENST00000433254 2404 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 DDX10P1-201ENST00000448545 1933 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 AL137003.2-201ENST00000606924 2538 ntBASIC4.95□□□□□ -1.62
COL17A1Q9UMD9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 RNU6-188P-201ENST00000364207 107 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 RNU4-50P-201ENST00000364361 141 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 Y_RNA.497-201ENST00000384447 98 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 SNORA68.2-201ENST00000391263 128 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 RNU4-65P-201ENST00000410473 140 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 RPL30P2-201ENST00000414021 291 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC096920.1-201ENST00000423991 241 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC002075.2-201ENST00000425207 252 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 RNU6-307P-201ENST00000516743 106 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC093023.1-201ENST00000547375 507 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC024619.4-201ENST00000580924 316 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 MIR3941-201ENST00000582572 103 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC005899.2-201ENST00000584353 90 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 U2.17-201ENST00000611454 95 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 SNHG22-203ENST00000617833 660 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC103705.1-201ENST00000619013 241 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC027290.2-201ENST00000623210 18662 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 FAM35DP-201ENST00000323387 2712 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 Y_RNA.261-201ENST00000364631 102 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 RNA5SP205-201ENST00000364653 136 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms