Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MIR4765-201ENST00000585007 77 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 MIR4781-201ENST00000585250 76 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 AC004908.3-201ENST00000610248 625 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 AC093536.2-201ENST00000565257 1406 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 ZNF680P1-201ENST00000436625 1469 ntBASIC4.27□□□□□ -1.73
SHROOM4Q9ULL8 MTND4P14-201ENST00000435799 1354 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 AC138393.1-203ENST00000327086 343 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 Y_RNA.140-201ENST00000363474 103 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 RNU6-550P-201ENST00000391057 101 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 RNU2-29P-201ENST00000410423 189 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 AL031779.1-201ENST00000415663 330 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 MICF-203ENST00000432679 129 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 RPS29P15-201ENST00000458329 171 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 HMGB1P29-201ENST00000505659 499 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 RNU5B-3P-201ENST00000516601 115 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 OR1M4P-201ENST00000589199 287 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 AC012507.3-201ENST00000603556 477 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 NDUFA8P1-201ENST00000605525 367 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 MTND4P27-201ENST00000450813 1354 ntBASIC4.26□□□□□ -1.73
SHROOM4Q9ULL8 SNORA75B-201ENST00000384053 137 ntBASIC4.25□□□□□ -1.73
SHROOM4Q9ULL8 RNU4-46P-201ENST00000410818 138 ntBASIC4.25□□□□□ -1.73
SHROOM4Q9ULL8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.25□□□□□ -1.73
SHROOM4Q9ULL8 AL445687.1-201ENST00000439946 251 ntBASIC4.25□□□□□ -1.73
SHROOM4Q9ULL8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.25□□□□□ -1.73
SHROOM4Q9ULL8 AC074344.1-201ENST00000512823 224 ntBASIC4.25□□□□□ -1.73
SHROOM4Q9ULL8 AC008121.1-201ENST00000603244 268 ntBASIC4.25□□□□□ -1.73
SHROOM4Q9ULL8 AC073534.2-201ENST00000620377 381 ntBASIC4.25□□□□□ -1.73
SHROOM4Q9ULL8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SHROOM4Q9ULL8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 RNU6-259P-201ENST00000383999 107 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AL356010.1-201ENST00000456364 102 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 snoU109.2-201ENST00000459316 135 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 MTCO3P7-201ENST00000510008 774 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AL449363.1-201ENST00000617815 186 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 MIR6766-201ENST00000622641 72 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AL359854.1-201ENST00000614203 1594 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 RNU6-858P-201ENST00000362436 107 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 RNU1-17P-201ENST00000363022 152 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 RNY1P10-201ENST00000363268 113 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 Y_RNA.159-201ENST00000363674 87 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 Y_RNA.466-201ENST00000384294 113 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 SNORA17.3-201ENST00000391159 129 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 EEF1A1P40-201ENST00000412883 573 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AL162395.1-201ENST00000457882 422 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 RNU6-1178P-201ENST00000516674 107 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 SCARNA3-201ENST00000517097 143 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 BTF3P12-201ENST00000519620 469 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 AC004223.2-201ENST00000590309 544 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 RNU6-91P-201ENST00000607774 107 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.24□□□□□ -1.73
SHROOM4Q9ULL8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 Y_RNA.1-201ENST00000352915 104 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 MIR10A-201ENST00000385043 110 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AL353621.1-201ENST00000418219 243 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC092427.1-202ENST00000430569 476 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC004383.1-201ENST00000438135 289 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC006026.2-201ENST00000457376 180 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC108078.1-201ENST00000508073 725 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 SCARNA16.3-201ENST00000516595 184 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 MIR4703-201ENST00000577728 79 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 MIR7157-201ENST00000635801 60 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 AC092447.7-201ENST00000422212 1621 ntBASIC4.23□□□□□ -1.73
SHROOM4Q9ULL8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 RNU6-461P-201ENST00000364195 107 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 AL451074.3-201ENST00000437709 472 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 RPL36AP48-201ENST00000485521 314 ntBASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM4Q9ULL8 AC079140.5-201ENST00000507882 310 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms