Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 Y_RNA.721-201ENST00000517207 102 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC144568.1-201ENST00000520139 137 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 DNAJC8P1-201ENST00000554535 372 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL158827.2-201ENST00000602494 330 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AP001836.1-201ENST00000604675 523 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AP000942.4-201ENST00000604811 241 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 BRDTP1-201ENST00000605735 677 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 SNORA62.6-201ENST00000606322 83 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL606534.2-204ENST00000635008 178 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL691447.3-201ENST00000635020 330 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC007256.1-201ENST00000392253 2765 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AL136164.4-201ENST00000625013 2135 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AP001148.1-201ENST00000624124 2359 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 Y_RNA.123-201ENST00000363338 102 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MTND3P2-201ENST00000438452 342 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 PRSS3P4-201ENST00000453323 162 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RN7SKP210-201ENST00000459176 261 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RPS29P27-201ENST00000463711 170 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC105758.1-201ENST00000506038 399 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RAC1P2-201ENST00000511164 579 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RNU6-764P-201ENST00000516396 105 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RN7SKP83-201ENST00000516512 178 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 HSBP1P1-201ENST00000555205 166 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC004584.2-201ENST00000570407 410 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MIR4425-201ENST00000580572 84 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MIR3922-201ENST00000585192 84 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 HMGN2P15-201ENST00000585707 270 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC009318.2-201ENST00000610917 651 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AL162373.1-201ENST00000620433 407 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC097372.5-201ENST00000623665 376 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MIR3529-201ENST00000637713 78 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC009541.1-201ENST00000438279 2662 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 Y_RNA.424-201ENST00000384063 103 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 RNU6-198P-201ENST00000384258 104 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 FTH1P15-201ENST00000406984 280 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC074117.2-201ENST00000417130 397 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 MRPS18CP6-201ENST00000423587 223 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC005300.1-201ENST00000428401 373 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 RNU6-581P-201ENST00000516214 105 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AP000867.2-201ENST00000532468 320 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 MIR4738-201ENST00000579134 87 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AL161756.2-201ENST00000604597 246 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC019159.1-201ENST00000605094 187 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC019176.2-201ENST00000611579 315 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC012314.7-201ENST00000619693 93 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC241585.2-209ENST00000638217 143 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC004944.1-201ENST00000517807 3059 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 SNORD56.1-201ENST00000362913 68 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 SNORD50.1-201ENST00000362987 71 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 MTCYBP2-201ENST00000407745 171 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 Y_RNA.605-201ENST00000410577 105 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 RNA5SP38-201ENST00000410750 119 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 CYCSP32-201ENST00000440548 321 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AC010099.1-201ENST00000455434 375 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 U3.44-201ENST00000458938 192 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 RNU7-23P-201ENST00000459465 62 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms