Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 Y_RNA.721-201ENST00000517207 102 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC144568.1-201ENST00000520139 137 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 DNAJC8P1-201ENST00000554535 372 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL158827.2-201ENST00000602494 330 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AP001836.1-201ENST00000604675 523 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AP000942.4-201ENST00000604811 241 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 BRDTP1-201ENST00000605735 677 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 SNORA62.6-201ENST00000606322 83 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL606534.2-204ENST00000635008 178 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AL691447.3-201ENST00000635020 330 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 AC007256.1-201ENST00000392253 2765 ntBASIC4.26□□□□□ -1.73
DDX41Q9UJV9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX41Q9UJV9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AL136164.4-201ENST00000625013 2135 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AP001148.1-201ENST00000624124 2359 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 Y_RNA.123-201ENST00000363338 102 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MTND3P2-201ENST00000438452 342 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 PRSS3P4-201ENST00000453323 162 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RN7SKP210-201ENST00000459176 261 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RPS29P27-201ENST00000463711 170 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC105758.1-201ENST00000506038 399 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RAC1P2-201ENST00000511164 579 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RNU6-764P-201ENST00000516396 105 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RN7SKP83-201ENST00000516512 178 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 HSBP1P1-201ENST00000555205 166 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC004584.2-201ENST00000570407 410 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MIR4425-201ENST00000580572 84 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MIR3922-201ENST00000585192 84 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 HMGN2P15-201ENST00000585707 270 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC009318.2-201ENST00000610917 651 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AL162373.1-201ENST00000620433 407 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC097372.5-201ENST00000623665 376 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 MIR3529-201ENST00000637713 78 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 AC009541.1-201ENST00000438279 2662 ntBASIC4.25□□□□□ -1.73
DDX41Q9UJV9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX41Q9UJV9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 Y_RNA.424-201ENST00000384063 103 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 RNU6-198P-201ENST00000384258 104 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 FTH1P15-201ENST00000406984 280 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC074117.2-201ENST00000417130 397 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 MRPS18CP6-201ENST00000423587 223 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC005300.1-201ENST00000428401 373 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 RNU6-581P-201ENST00000516214 105 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AP000867.2-201ENST00000532468 320 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 MIR4738-201ENST00000579134 87 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AL161756.2-201ENST00000604597 246 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC019159.1-201ENST00000605094 187 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC019176.2-201ENST00000611579 315 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC012314.7-201ENST00000619693 93 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC241585.2-209ENST00000638217 143 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX41Q9UJV9 AC004944.1-201ENST00000517807 3059 ntBASIC4.24□□□□□ -1.73
DDX41Q9UJV9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 SNORD56.1-201ENST00000362913 68 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 SNORD50.1-201ENST00000362987 71 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 MTCYBP2-201ENST00000407745 171 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 Y_RNA.605-201ENST00000410577 105 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 RNA5SP38-201ENST00000410750 119 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 CYCSP32-201ENST00000440548 321 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AC010099.1-201ENST00000455434 375 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 U3.44-201ENST00000458938 192 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 RNU7-23P-201ENST00000459465 62 ntBASIC4.23□□□□□ -1.73
DDX41Q9UJV9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX41Q9UJV9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms