Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 MTATP6P25-201ENST00000574491 261 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 AL713866.2-201ENST00000603579 219 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 AL445435.1-201ENST00000604232 665 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 AL022345.1-201ENST00000607292 135 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 RNU6-1167P-201ENST00000363227 94 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 RNU6-529P-201ENST00000363383 104 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 RNU6-1122P-201ENST00000384449 107 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 RNU6-278P-201ENST00000390945 109 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 MIR1283-2-201ENST00000408621 87 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 USP9YP18-201ENST00000425912 695 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 GTF2IP3-201ENST00000433887 494 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 MTND5P15-201ENST00000434246 349 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 USP9YP24-201ENST00000434374 697 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 AL590365.1-201ENST00000450788 243 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 RPL18AP17-201ENST00000455326 198 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 RPL7P43-201ENST00000478876 753 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 MTND5P13-201ENST00000513046 1079 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 SNORA25.11-201ENST00000515935 105 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 RNU6-751P-201ENST00000516382 101 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 AC023632.1-201ENST00000518463 375 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 MTCO3P15-201ENST00000526563 574 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 AL445264.1-201ENST00000621719 171 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 AL136313.1-201ENST00000624804 202 ntBASIC0.82□□□□□ -2.28
PHRF1Q9P1Y6 MTND4P12-201ENST00000498999 1377 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 RNU5B-1-201ENST00000363286 116 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 Y_RNA.294-201ENST00000364916 102 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 SNORA25B-201ENST00000365507 128 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 AC009310.1-201ENST00000414414 451 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 AC245047.4-201ENST00000433189 144 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 MTCO3P45-201ENST00000443036 613 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 AC020550.1-201ENST00000447385 163 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 RPF2P2-201ENST00000504693 896 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 SMURF2P1-201ENST00000514992 481 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 RNU6-583P-201ENST00000516012 92 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 RNU6-143P-201ENST00000516942 93 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 MTCO2P15-201ENST00000532655 656 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 AC122134.1-202ENST00000569111 1201 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 AC022202.1-201ENST00000613515 211 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 AC010975.3-201ENST00000618727 978 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 CDR1-202ENST00000625883 1485 ntBASIC0.81□□□□□ -2.28
PHRF1Q9P1Y6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 RNU1-39P-201ENST00000383897 165 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 RPL21P24-201ENST00000413752 448 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 EIF4EP2-201ENST00000422816 654 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 C1DP1-201ENST00000426049 402 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 AL158053.1-201ENST00000441503 453 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 ELOCP30-201ENST00000447108 299 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 RNU7-59P-201ENST00000459101 61 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 AC093809.1-201ENST00000509155 340 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 SNORA4.4-201ENST00000515921 135 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 AC079598.5-201ENST00000547460 117 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 SNRPGP1-201ENST00000553864 222 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 BBIP1P1-201ENST00000602999 279 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 HSPE1P19-201ENST00000603327 295 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 AC067863.3-201ENST00000624172 122 ntBASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.8□□□□□ -2.28
PHRF1Q9P1Y6 AP000776.1-201ENST00000530032 1663 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 OR5T3-201ENST00000303059 1023 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 RNU6-97P-201ENST00000363387 104 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 RNU6-792P-201ENST00000363490 107 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 SNORD26-201ENST00000384147 75 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 MIR30A-201ENST00000385092 71 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 MIR618-201ENST00000385287 98 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 DHFRP6-201ENST00000401776 268 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 RNU2-48P-201ENST00000410694 191 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 USP9YP33-201ENST00000412220 421 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 USP9YP35-201ENST00000435696 412 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 MTATP6P30-201ENST00000443540 664 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 PTENP1-201ENST00000447117 1215 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 RNU7-136P-201ENST00000458819 69 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 AP001324.2-201ENST00000461163 319 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 RPL39P28-201ENST00000465655 155 ntBASIC0.79□□□□□ -2.28
PHRF1Q9P1Y6 AC010631.1-201ENST00000474150 156 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms