Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 U7.2-201ENST00000607576 63 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 AL357075.2-201ENST00000614906 189 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 AC092628.2-201ENST00000622492 339 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 AL359693.1-201ENST00000614959 2407 ntBASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CUEDC1Q9NWM3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 SCN1A-220ENST00000641603 12506 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 U3.30-201ENST00000391308 210 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 MIR1302-4-201ENST00000408701 150 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 BPY2DP-201ENST00000422208 265 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 AURKAPS2-201ENST00000454983 333 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 PPIAP15-201ENST00000479662 484 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 RN7SL558P-201ENST00000497468 299 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 RNU5E-3P-201ENST00000515913 68 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 AC093249.4-201ENST00000564755 259 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 CYCSP40-201ENST00000575927 294 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 AC024153.1-201ENST00000603103 365 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 AL391358.1-201ENST00000605342 190 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 AC069294.1-201ENST00000608397 350 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 AC002076.2-201ENST00000617362 122 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 TLK1P1-201ENST00000456760 2440 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 AP000542.2-201ENST00000623199 6179 ntBASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CUEDC1Q9NWM3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CUEDC1Q9NWM3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CUEDC1Q9NWM3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CUEDC1Q9NWM3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CUEDC1Q9NWM3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 SNORA22-201ENST00000383907 134 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 SNORD37.2-201ENST00000391075 66 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 RPL36AP10-201ENST00000421785 322 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 RPL23AP95-201ENST00000426806 265 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 AL162151.2-201ENST00000448875 158 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 snoU109.2-201ENST00000459316 135 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-625P-201ENST00000459412 107 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 SNRPGP3-201ENST00000469405 227 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 RPL21P126-201ENST00000470049 478 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-966P-201ENST00000516479 104 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-1282P-201ENST00000516735 96 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 MIR3646-201ENST00000578301 84 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 LARP7P3-201ENST00000579888 337 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 AC023043.3-201ENST00000593113 385 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 AC010999.1-201ENST00000611856 324 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 AC015914.2-201ENST00000618167 288 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 MIR7703-201ENST00000620784 77 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 AC039056.2-201ENST00000622261 511 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 AC007256.1-201ENST00000392253 2765 ntBASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.65□□□□□ -1.67
CUEDC1Q9NWM3 AL133243.3-201ENST00000617415 3004 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 SRP72P2-201ENST00000344851 1979 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 RNA5SP502-201ENST00000362694 119 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 Y_RNA.101-201ENST00000363154 102 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-1310P-201ENST00000384153 107 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 U3.19-201ENST00000390893 196 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 RNU6-1245P-201ENST00000411130 106 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AL645608.4-201ENST00000423619 154 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AC098614.2-201ENST00000426040 255 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 RNA5SP54-201ENST00000516951 92 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AP001328.1-201ENST00000528550 176 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AC021269.2-201ENST00000532318 330 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AC109810.1-201ENST00000534066 224 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AC018448.1-201ENST00000552843 316 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AC090877.1-201ENST00000561418 344 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AC022726.1-201ENST00000587475 207 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 DEFB117-201ENST00000602356 141 ntBASIC4.64□□□□□ -1.67
CUEDC1Q9NWM3 AL121932.1-201ENST00000605542 214 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms