Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AC093249.1-201ENST00000567049 203 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AL354943.1-201ENST00000572103 781 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 MTCYBP33-201ENST00000575007 1130 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 MIR4713-201ENST00000582691 75 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 DEFB131E-202ENST00000602581 683 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AC021646.1-201ENST00000605469 484 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 uc_338.15-201ENST00000615470 191 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AL359547.2-201ENST00000615810 418 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 U6.42-201ENST00000618440 107 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AC006026.1-201ENST00000444025 1803 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AL391994.1-201ENST00000254724 282 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AC073343.1-201ENST00000328239 651 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 SNORD3E-201ENST00000362899 217 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 RNU6-843P-201ENST00000384454 104 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 MIR10A-201ENST00000385043 110 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 HSFY7P-201ENST00000432672 318 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.57□□□□□ -2.16
TREX1Q9NSU2 HSFY8P-201ENST00000437934 318 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AC104058.1-201ENST00000448028 297 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AL137159.1-201ENST00000452808 512 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 HSFY5P-201ENST00000453726 309 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 MTND1P12-201ENST00000455231 147 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AMD1P1-201ENST00000457220 922 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.57□□□□□ -2.16
TREX1Q9NSU2 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 RNU6-667P-201ENST00000517186 102 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.57□□□□□ -2.16
TREX1Q9NSU2 ADI1P3-201ENST00000549509 470 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.57□□□□□ -2.16
TREX1Q9NSU2 SNRPGP17-201ENST00000603780 214 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AC018714.1-201ENST00000605028 208 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 BNIP3P10-201ENST00000605360 577 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 uc_338.5-201ENST00000611839 155 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 AC092192.1-201ENST00000633154 1018 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 MTND4P23-201ENST00000447723 1363 ntBASIC1.57□□□□□ -2.16
TREX1Q9NSU2 MIR412-201ENST00000362142 91 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.56□□□□□ -2.16
TREX1Q9NSU2 PGBD4P6-201ENST00000421501 610 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AL627311.1-201ENST00000431514 115 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AL591806.2-201ENST00000433122 173 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.56□□□□□ -2.16
TREX1Q9NSU2 IFNA20P-201ENST00000436840 528 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 MTND2P29-201ENST00000438595 412 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.56□□□□□ -2.16
TREX1Q9NSU2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.56□□□□□ -2.16
TREX1Q9NSU2 NDUFA5P6-201ENST00000542110 379 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AL670379.2-201ENST00000604983 252 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AL670379.4-201ENST00000605279 254 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AC105129.3-201ENST00000605455 485 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AP002360.4-201ENST00000606980 481 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 AC241585.2-209ENST00000638217 143 ntBASIC1.56□□□□□ -2.16
TREX1Q9NSU2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 RNU6-1010P-201ENST00000362757 107 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 RNU6-529P-201ENST00000363383 104 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 RNU6-72P-201ENST00000384285 79 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 SNORD116-20-201ENST00000384529 92 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 RNU6-1179P-201ENST00000384667 107 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 CISD1P1-201ENST00000393907 327 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 MRPL42P2-201ENST00000403169 426 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 MTCYBP36-201ENST00000404146 440 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AC114491.1-201ENST00000416095 246 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AC137499.1-201ENST00000427602 88 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AL590365.1-201ENST00000450788 243 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 RNA5SP57-201ENST00000459463 123 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AC006512.1-201ENST00000468816 291 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AC010587.1-201ENST00000505809 469 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AC112206.3-201ENST00000514578 389 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 RNU6-123P-201ENST00000516163 102 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 SNORA44.1-201ENST00000517031 108 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AP004607.1-201ENST00000524456 203 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 ELOCP32-201ENST00000548625 324 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 IMMP1LP2-201ENST00000552954 492 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AC091489.2-201ENST00000566263 604 ntBASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.55□□□□□ -2.16
TREX1Q9NSU2 AL022154.1-201ENST00000604698 785 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms