Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 AC099654.5-201ENST00000636479 350 ntBASIC0.85□□□□□ -2.27
MRPL40Q9NQ50 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
MRPL40Q9NQ50 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 RNU6-1010P-201ENST00000362757 107 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 RNU6-1274P-201ENST00000384557 107 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 RNU11-5P-201ENST00000391216 129 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 AL133475.1-201ENST00000404414 305 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 FTH1P12-201ENST00000432137 551 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 AL591212.2-201ENST00000433923 257 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 BRK1P2-201ENST00000442875 223 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 RPL9P9-202ENST00000466501 579 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 RNU2-53P-201ENST00000516257 147 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 RN7SKP256-201ENST00000517201 314 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 DEFB108E-201ENST00000524692 240 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 AF038458.1-201ENST00000588406 262 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 AL391646.1-201ENST00000603860 190 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 Z82243.1-201ENST00000609432 473 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 AC027335.2-201ENST00000624030 375 ntBASIC0.84□□□□□ -2.27
MRPL40Q9NQ50 AC009541.1-201ENST00000438279 2662 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 RNU6-23P-201ENST00000363283 107 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 RNU6-529P-201ENST00000363383 104 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 RNU6-112P-201ENST00000363599 104 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 RNA5SP325-201ENST00000363756 130 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 Y_RNA.255-201ENST00000364581 97 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 RNU1-133P-201ENST00000364867 167 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 DHFRP6-201ENST00000401776 268 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 MTCO3P45-201ENST00000443036 613 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 RNU6-1132P-201ENST00000459214 107 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 RPL37P6-201ENST00000460682 294 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 RNA5SP384-201ENST00000516615 116 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 MIR3937-201ENST00000580135 106 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 AC005786.1-201ENST00000588553 154 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 AC008759.3-201ENST00000613300 508 ntBASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
MRPL40Q9NQ50 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 SNRPEP3-201ENST00000338402 276 ntBASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 Y_RNA.205-201ENST00000364128 113 ntBASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 CBX3P6-201ENST00000430257 527 ntBASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 AC114981.1-201ENST00000503897 678 ntBASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 RNU6-1261P-201ENST00000517194 104 ntBASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 CR383656.8-201ENST00000549046 145 ntBASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 CYP3A52P-201ENST00000563326 91 ntBASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 MIR3169-201ENST00000578032 83 ntBASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 MIR8065-201ENST00000620577 100 ntBASIC0.82□□□□□ -2.28
MRPL40Q9NQ50 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 Y_RNA.25-201ENST00000362528 102 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 RNU6-353P-201ENST00000364266 108 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 RNU6-17P-201ENST00000384245 107 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 RNU6-1065P-201ENST00000384513 106 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 RNU6-18P-201ENST00000384527 107 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 MIR216A-201ENST00000385063 110 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 AL139397.2-201ENST00000404529 772 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 RN7SL793P-201ENST00000583259 296 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 AC112220.3-201ENST00000605502 502 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 AC004908.3-201ENST00000610248 625 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 AL357080.1-201ENST00000617394 239 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 AL136313.1-201ENST00000624804 202 ntBASIC0.81□□□□□ -2.28
MRPL40Q9NQ50 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 RNU6-188P-201ENST00000364207 107 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 RNU6-160P-201ENST00000384591 107 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 MIR186-201ENST00000384988 86 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 RNU6-360P-201ENST00000390944 104 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 AC069282.1-201ENST00000411911 526 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 AC006461.1-201ENST00000412637 326 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 AL589872.1-201ENST00000426602 288 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 OR2AQ1P-201ENST00000451972 200 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 MTCYBP40-201ENST00000509390 1135 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 RN7SKP49-201ENST00000516675 260 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 AC090970.3-201ENST00000612566 866 ntBASIC0.8□□□□□ -2.28
MRPL40Q9NQ50 U6.99-201ENST00000637524 83 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms