Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC092798.1-201ENST00000458542 409 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 snoU109.2-201ENST00000459316 135 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 RNU7-66P-201ENST00000459469 62 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AC103851.1-201ENST00000506833 274 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 MIR892C-201ENST00000516410 77 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 MTCO3P23-201ENST00000561363 289 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AMZ2P1-203ENST00000565833 850 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 MIR5692C1-201ENST00000585309 91 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AC020895.1-201ENST00000595362 272 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 RMST_7.1-201ENST00000621935 268 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AL137790.1-201ENST00000634283 177 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AL133216.2-202ENST00000634512 349 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AC099654.7-201ENST00000635788 2127 ntBASIC2.84□□□□□ -1.96
PCDH9Q9HC56 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.96
PCDH9Q9HC56 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
PCDH9Q9HC56 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PCDH9Q9HC56 Y_RNA.324-201ENST00000365165 102 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 Y_RNA.480-201ENST00000384364 102 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 MIR592-201ENST00000384959 97 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 SNORA40C-201ENST00000391285 128 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AL356432.1-201ENST00000405809 419 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 RNU2-3P-201ENST00000410144 191 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 Z92545.1-201ENST00000411782 234 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AL139281.1-201ENST00000422120 335 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 SKA2P1-201ENST00000425592 390 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AC098614.2-201ENST00000426040 255 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AL135938.1-201ENST00000443141 297 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AL078601.1-201ENST00000444542 271 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 RPS27AP9-201ENST00000477681 438 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 RN7SL499P-201ENST00000481141 276 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 RNU6-1332P-201ENST00000516666 104 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 SNORA25.17-201ENST00000517184 124 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AP000867.2-201ENST00000532468 320 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDH9Q9HC56 MIR4782-201ENST00000577987 79 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.83□□□□□ -1.96
PCDH9Q9HC56 MIR3672-201ENST00000584290 82 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 RPL23AP78-201ENST00000599928 470 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AC019159.1-201ENST00000605094 187 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 AC021646.1-201ENST00000605469 484 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 RNU6-85P-201ENST00000605989 107 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.83□□□□□ -1.96
PCDH9Q9HC56 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDH9Q9HC56 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PCDH9Q9HC56 RNU6-384P-201ENST00000364900 104 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 SNORD21-201ENST00000383953 95 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 RNU1-73P-201ENST00000383971 164 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 RNU6-1013P-201ENST00000384180 107 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 RNU6-166P-201ENST00000384371 107 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDH9Q9HC56 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDH9Q9HC56 TOMM20P4-201ENST00000427861 435 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 HMGB1P9-201ENST00000429856 646 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDH9Q9HC56 BRK1P2-201ENST00000442875 223 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 RPL39P40-201ENST00000445481 146 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDH9Q9HC56 AC010099.1-201ENST00000455434 375 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 MTND1P11-201ENST00000456661 876 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 RPL26P9-201ENST00000457466 433 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 TRBVA-201ENST00000498804 316 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDH9Q9HC56 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDH9Q9HC56 RNU6-864P-201ENST00000516256 108 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 Y_RNA.682-201ENST00000516457 100 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 RNU6-1069P-201ENST00000516612 133 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 RNU6-256P-201ENST00000516747 97 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 CYCSP27-201ENST00000527643 293 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 AC025423.5-201ENST00000550230 219 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 CYCSP39-201ENST00000565821 309 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 LRRC37A5P-203ENST00000580181 585 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 RPL23AP88-201ENST00000605759 454 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 AC025253.1-201ENST00000613623 543 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 uc_338.15-201ENST00000615470 191 ntBASIC2.82□□□□□ -1.96
PCDH9Q9HC56 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH9Q9HC56 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH9Q9HC56 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDH9Q9HC56 AC022336.2-201ENST00000568966 2538 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-37P-201ENST00000362692 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 Y_RNA.184-201ENST00000363884 108 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-11P-201ENST00000364234 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 SNORD14B-201ENST00000364533 90 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-7-201ENST00000364784 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-8-201ENST00000365467 107 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms