Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 MIR3660-201ENST00000584845 100 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 NIFKP6-201ENST00000598115 845 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 AL391001.1-201ENST00000602747 715 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 AL592221.1-201ENST00000605266 382 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 AC080013.3-201ENST00000606839 578 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 Z82243.1-201ENST00000609432 473 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 AC130324.3-201ENST00000614165 542 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 AL138960.2-201ENST00000625145 535 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.06□□□□□ -2.24
VCX3BQ9H321 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.06□□□□□ -2.24
VCX3BQ9H321 MIR3529-201ENST00000637713 78 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 HAUS6P2-201ENST00000433254 2404 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 RNU4-82P-201ENST00000362443 140 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 RNU6-843P-201ENST00000384454 104 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 SNORA40.4-201ENST00000390971 128 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VCX3BQ9H321 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VCX3BQ9H321 MIR1267-201ENST00000408723 78 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 RNU2-32P-201ENST00000411193 191 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.05□□□□□ -2.24
VCX3BQ9H321 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 AL583843.1-201ENST00000456070 346 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 DUXAP8-207ENST00000456786 622 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
VCX3BQ9H321 AC109329.1-201ENST00000518744 317 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.05□□□□□ -2.24
VCX3BQ9H321 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.05□□□□□ -2.24
VCX3BQ9H321 MIR1273C-201ENST00000578669 77 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.05□□□□□ -2.24
VCX3BQ9H321 KC877982.1-201ENST00000602313 470 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 AC012360.2-201ENST00000609349 391 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 MIR6845-201ENST00000613182 61 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 uc_338.15-201ENST00000615470 191 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 AL132822.1-201ENST00000617063 513 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.05□□□□□ -2.24
VCX3BQ9H321 AC092104.1-201ENST00000497346 1441 ntBASIC1.05□□□□□ -2.24
VCX3BQ9H321 FARSBP1-201ENST00000435808 1778 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 Y_RNA.40-201ENST00000362645 93 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 SNORD3E-201ENST00000362899 217 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 RNU6-942P-201ENST00000363002 107 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 RNU4-91P-201ENST00000364778 135 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 RNY3P13-201ENST00000365542 102 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 RNU6-546P-201ENST00000383991 107 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 RNU6-622P-201ENST00000384272 103 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 U8.13-201ENST00000390842 128 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 UBE2V1P10-201ENST00000414685 269 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.04□□□□□ -2.24
VCX3BQ9H321 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.04□□□□□ -2.24
VCX3BQ9H321 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.04□□□□□ -2.24
VCX3BQ9H321 HMGB1P30-201ENST00000492455 606 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.04□□□□□ -2.24
VCX3BQ9H321 SNORA31.17-201ENST00000516953 127 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 RNU6-1092P-201ENST00000516955 87 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 RN7SKP256-201ENST00000517201 314 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.04□□□□□ -2.24
VCX3BQ9H321 COPS8P3-201ENST00000526024 482 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC022616.8-201ENST00000533569 253 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC092325.1-201ENST00000566449 554 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC069431.2-201ENST00000604149 1099 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC073413.2-201ENST00000604332 360 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AP000860.1-201ENST00000605250 559 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC004492.1-201ENST00000607036 742 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC004908.3-201ENST00000610248 625 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AL078604.3-201ENST00000615580 211 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 uc_338.12-201ENST00000616344 181 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 AC009269.6-201ENST00000621778 588 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.04□□□□□ -2.24
VCX3BQ9H321 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VCX3BQ9H321 ZNF209P-201ENST00000593450 2304 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 RNA5SP327-201ENST00000362494 101 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 RNU6-655P-201ENST00000362858 107 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 RNU6-529P-201ENST00000363383 104 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 RNU6-414P-201ENST00000363705 104 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 RNU6-944P-201ENST00000364023 107 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 SRIP3-201ENST00000413200 219 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC009518.2-201ENST00000418056 731 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 AL365338.1-201ENST00000422282 858 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 MTCO3P5-201ENST00000433620 714 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC093899.1-201ENST00000457984 376 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 AL139824.2-201ENST00000458731 1095 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 UBL5P3-201ENST00000475112 231 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 UBL5P1-201ENST00000507979 193 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC018630.3-201ENST00000542637 96 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 MIR3146-201ENST00000580367 79 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 AC103987.3-201ENST00000582071 292 ntBASIC1.03□□□□□ -2.24
VCX3BQ9H321 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms