Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AL591704.1-201ENST00000432574 275 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 MTND3P1-201ENST00000441336 220 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 RN7SKP256-201ENST00000517201 314 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 SNORA31.24-201ENST00000517232 57 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AP005660.1-201ENST00000522972 293 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AP003392.2-201ENST00000527269 208 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AP004247.1-201ENST00000531556 1289 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AC022616.8-201ENST00000533569 253 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AC015720.1-201ENST00000565251 277 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AC023043.2-201ENST00000589678 1026 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 VN1R82P-201ENST00000601481 356 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AL391001.1-201ENST00000602747 715 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 WISP1-OT1-201ENST00000602893 642 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AP000860.1-201ENST00000605250 559 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AL365204.3-201ENST00000612448 685 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 MIR3529-201ENST00000637713 78 ntBASIC1.25□□□□□ -2.21
CDCA4Q9BXL8 AC092104.1-201ENST00000497346 1441 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 FARSBP1-201ENST00000435808 1778 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 Y_RNA.33-201ENST00000362591 102 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 RNU6-60P-201ENST00000364792 103 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 RNU6-1274P-201ENST00000384557 107 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 FGF7P8-201ENST00000402994 292 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 USP9YP18-201ENST00000425912 695 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AL121601.2-201ENST00000438019 707 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AL583843.1-201ENST00000456070 346 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AC108729.3-201ENST00000513484 108 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 RNU6-677P-201ENST00000516914 101 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AC018630.3-201ENST00000542637 96 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AL160236.1-201ENST00000556317 195 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 SUB1P3-201ENST00000564581 315 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 CLIC4P2-201ENST00000601934 717 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AL645939.4-201ENST00000604495 135 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AL158042.1-201ENST00000605338 460 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AC016727.1-205ENST00000605437 569 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 uc_338.15-201ENST00000615470 191 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AC091304.6-201ENST00000619761 202 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AC092656.1-203ENST00000624134 423 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 AC090517.3-201ENST00000625170 141 ntBASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CDCA4Q9BXL8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 SNORD3E-201ENST00000362899 217 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 RNU6-511P-201ENST00000363496 107 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 RNY3P13-201ENST00000365542 102 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 RNU6-1242P-201ENST00000391052 103 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 RPL23AP36-201ENST00000413895 458 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 SNRPGP13-201ENST00000442212 177 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 HSPE1P24-201ENST00000450782 238 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 SNORD97-201ENST00000459187 142 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 AL670379.2-201ENST00000604983 252 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 AL592221.1-201ENST00000605266 382 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 AL670379.4-201ENST00000605279 254 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 PRR13P7-201ENST00000605538 430 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 Z82243.1-201ENST00000609432 473 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 MIR8074-201ENST00000615081 81 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 AC006338.1-201ENST00000618453 749 ntBASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.23□□□□□ -2.21
CDCA4Q9BXL8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 Y_RNA.46-201ENST00000362695 102 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 Y_RNA.67-201ENST00000362870 100 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 RNU4-68P-201ENST00000364314 141 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 RNU6-395P-201ENST00000365662 106 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 RNA5SP100-201ENST00000410903 110 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 RNA5SP59-201ENST00000410922 110 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AP1B1P2-201ENST00000416196 106 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AC118469.1-201ENST00000442943 488 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AL606517.1-201ENST00000446914 387 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 RPL23AP35-201ENST00000451906 501 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms