Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MTCO3P19-201ENST00000415864 321 ntBASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 TOMM22P6-201ENST00000465035 409 ntBASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 RPS29P19-201ENST00000479709 171 ntBASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 VN1R91P-201ENST00000594377 169 ntBASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 SNORD98-201ENST00000636377 67 ntBASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 ZNF826P-207ENST00000622273 1910 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 MTND5P27-201ENST00000428871 1720 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AL353746.1-201ENST00000566293 6881 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 Z75746.1-201ENST00000440243 2080 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 RNU6-655P-201ENST00000362858 107 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 RNU4-42P-201ENST00000364738 142 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 MIR513A2-201ENST00000385249 127 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 RPL31P41-201ENST00000477967 372 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC090525.1-201ENST00000479116 478 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 SEM1P1-201ENST00000506694 209 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC079598.5-201ENST00000547460 117 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC034105.4-201ENST00000568304 277 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC006600.1-201ENST00000572529 153 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC022655.2-201ENST00000577280 318 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 KLKP1-201ENST00000595979 403 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC008739.2-201ENST00000597006 317 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC008737.2-201ENST00000599446 118 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AL670379.2-201ENST00000604983 252 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC110741.2-201ENST00000605278 268 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 MIR432-201ENST00000606207 94 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 SNORA43.4-201ENST00000629559 138 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC243829.7-201ENST00000633081 225 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AP003122.5-201ENST00000527668 3766 ntBASIC4.52□□□□□ -1.69
TRAIPQ9BWF2 AL161912.2-201ENST00000565707 3007 ntBASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 MAPK10-322ENST00000641485 4530 ntBASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 Y_RNA.389-201ENST00000383924 113 ntBASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 AC012306.1-201ENST00000423267 114 ntBASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 AL353752.1-201ENST00000454946 260 ntBASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 RNU4-77P-201ENST00000516692 156 ntBASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 AC016727.2-201ENST00000603988 621 ntBASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 U2.1-201ENST00000618978 145 ntBASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TRAIPQ9BWF2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AC058791.1-201ENST00000608412 3198 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 RNU6-486P-201ENST00000363116 107 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 SNORD74.4-201ENST00000364129 80 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 Y_RNA.459-201ENST00000384251 102 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 MIR186-201ENST00000384988 86 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 UBA52P6-201ENST00000399822 382 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AL590556.1-201ENST00000423231 483 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AP000907.1-201ENST00000428428 510 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AC096644.2-201ENST00000429278 159 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AC091286.1-201ENST00000431233 461 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 Z82188.1-201ENST00000436709 154 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 OR2AQ1P-201ENST00000451972 200 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 RNU7-170P-201ENST00000459303 61 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AF213884.1-201ENST00000488102 463 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 RPL21P129-201ENST00000491732 478 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 SCARNA11.3-201ENST00000517276 130 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 RN7SL703P-201ENST00000578485 302 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 MIR3923-201ENST00000579521 83 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 MIR1254-2-201ENST00000579553 63 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AC011471.1-201ENST00000585766 187 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 RPS29P30-201ENST00000600975 111 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AL159153.1-201ENST00000619688 317 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AL162373.1-201ENST00000620433 407 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AC002064.3-201ENST00000623448 346 ntBASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
TRAIPQ9BWF2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms