Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 HMGN1P13-201ENST00000505795 138 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AC024589.1-201ENST00000512207 263 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 CENPUP1-201ENST00000526649 1202 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AC084364.2-201ENST00000546924 395 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.6□□□□□ -2.31
LIMD2Q9BT23 MIR3912-201ENST00000577566 105 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 MIR4293-201ENST00000584305 78 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AC092656.1-203ENST00000624134 423 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 AL356094.1-201ENST00000624663 1212 ntBASIC0.6□□□□□ -2.31
LIMD2Q9BT23 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 RNA5SP99-201ENST00000364020 114 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 RNU6-468P-201ENST00000384003 109 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 RNU6-968P-201ENST00000384076 107 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 MIR19A-201ENST00000384878 82 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 MIR301A-201ENST00000385261 86 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 RNA5SP390-201ENST00000410191 113 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 RNU2-23P-201ENST00000410545 195 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AL589872.1-201ENST00000426602 288 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 MTND5P25-201ENST00000430499 799 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC245047.4-201ENST00000433189 144 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 MTCO3P43-201ENST00000440974 771 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 RPL9P9-202ENST00000466501 579 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC093852.1-201ENST00000503587 266 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 UBL5P1-201ENST00000507979 193 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 SNORA31.19-201ENST00000517079 126 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 DEFB131D-201ENST00000526803 184 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC079148.1-201ENST00000565944 819 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC137800.2-201ENST00000574375 120 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC015688.6-201ENST00000577737 104 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC060771.1-201ENST00000582031 164 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC098848.2-201ENST00000588023 330 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AL358072.1-201ENST00000604156 575 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AL445435.1-201ENST00000604232 665 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC026741.1-201ENST00000605892 482 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 snoU13.31-201ENST00000607291 104 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AC231657.1-201ENST00000624313 397 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 AP003485.1-201ENST00000625093 753 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 MIR1248-201ENST00000629190 106 ntBASIC0.59□□□□□ -2.31
LIMD2Q9BT23 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.59□□□□□ -2.32
LIMD2Q9BT23 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
LIMD2Q9BT23 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
LIMD2Q9BT23 RNU6-942P-201ENST00000363002 107 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 Y_RNA.327-201ENST00000365201 102 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 Y_RNA.534-201ENST00000384599 112 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AL592045.1-201ENST00000429867 352 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AL096829.2-201ENST00000446582 742 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 RPL30P12-201ENST00000474666 353 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AC108729.3-201ENST00000513484 108 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AP003465.2-201ENST00000602571 373 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AC013244.2-201ENST00000603396 103 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AC090186.1-201ENST00000605991 572 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AL020996.3-201ENST00000606617 222 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.58□□□□□ -2.32
LIMD2Q9BT23 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 AC091895.1-201ENST00000624494 256 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 MTND5P33-201ENST00000571250 1450 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
LIMD2Q9BT23 MTND5P35-201ENST00000557537 1720 ntBASIC0.58□□□□□ -2.32
LIMD2Q9BT23 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 Y_RNA.40-201ENST00000362645 93 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 SNORD114-6-201ENST00000364393 72 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 RNU1-36P-201ENST00000365130 165 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AC069282.1-201ENST00000411911 526 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 RAC1P6-201ENST00000423911 575 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 MTCYBP42-201ENST00000444653 1130 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 PGBD4P5-201ENST00000445958 426 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AL353718.1-201ENST00000451028 517 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 TPRKBP1-201ENST00000456243 481 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 RNU6-751P-201ENST00000516382 101 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms