Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNU4-46P-201ENST00000410818 138 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 RNA5SP111-201ENST00000411386 101 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 Z98742.2-201ENST00000431564 187 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AC011753.1-201ENST00000451001 220 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 EEF1B2P7-201ENST00000451177 676 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 RNU7-26P-201ENST00000458980 63 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AC008526.1-201ENST00000509149 338 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AC105417.1-201ENST00000514691 285 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 MIR892C-201ENST00000516410 77 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 Y_RNA.687-201ENST00000516558 91 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 RNA5SP503-201ENST00000517047 117 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AC010186.2-204ENST00000537668 439 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AC121758.2-201ENST00000553271 193 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AGGF1P4-201ENST00000568249 801 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AC073648.5-201ENST00000603502 305 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AL021997.1-201ENST00000605757 193 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AC008945.2-201ENST00000606056 604 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 uc_338.11-201ENST00000619132 160 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 MIR7157-201ENST00000635801 60 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 AL359854.1-201ENST00000614203 1594 ntBASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
HDHD3Q9BSH5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 MTND5P6-201ENST00000422338 1798 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 Y_RNA.194-201ENST00000363985 102 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 RNU6-1303P-201ENST00000364841 107 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AL663109.1-201ENST00000411498 844 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 UBE2V1P10-201ENST00000414685 269 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC003685.2-201ENST00000422795 395 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 MTCO3P30-201ENST00000426425 670 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 FABP5P14-201ENST00000437273 393 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AL451074.3-201ENST00000437709 472 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 USP9YP8-201ENST00000441913 500 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 IFNA11P-201ENST00000446352 526 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC073415.1-201ENST00000449240 153 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 RNU7-180P-201ENST00000459240 63 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 DYNLL1P5-201ENST00000467158 270 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC105313.1-201ENST00000509121 353 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 MTCYBP40-201ENST00000509390 1135 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 RNU2-69P-201ENST00000516061 100 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 RNA5SP200-201ENST00000516360 103 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 SNORA31.23-201ENST00000517219 133 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 BNIP3P6-201ENST00000549284 499 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC136619.2-201ENST00000563361 631 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC023824.2-201ENST00000566185 400 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 MTCYBP33-201ENST00000575007 1130 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 MIR5692A1-201ENST00000580523 69 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 MIR4424-201ENST00000585257 86 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AP001330.5-201ENST00000607176 411 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC097065.2-201ENST00000608159 533 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC004908.3-201ENST00000610248 625 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC245884.12-201ENST00000615364 59 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC009233.1-201ENST00000616477 371 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 U6.42-201ENST00000618440 107 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 MIR6132-201ENST00000622083 109 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 U6.114-201ENST00000636407 96 ntBASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
HDHD3Q9BSH5 AL136360.1-201ENST00000503377 1900 ntBASIC1.78□□□□□ -2.13
HDHD3Q9BSH5 MTND5P30-201ENST00000452896 1731 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AL354685.2-201ENST00000448218 1447 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 OR4G2P-201ENST00000328113 903 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 RNU6-552P-201ENST00000362869 119 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 RNU6-1287P-201ENST00000362914 107 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 RNA5SP37-201ENST00000365420 130 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 RNU6-487P-201ENST00000365430 104 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 RNU6-1060P-201ENST00000384664 107 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 MIR147B-201ENST00000390185 80 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 SNORA11.1-201ENST00000408133 129 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 RNU2-29P-201ENST00000410423 189 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 RNU2-16P-201ENST00000410712 136 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 HMGB3P2-201ENST00000411913 584 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 MTND1P23-201ENST00000416931 372 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 PGBD4P6-201ENST00000421501 610 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC073464.1-201ENST00000429823 534 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms