Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SNORA40C-201ENST00000391285 128 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 CIR1P3-201ENST00000405137 479 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RNU6-1068P-201ENST00000410958 103 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AL160275.3-201ENST00000423876 471 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MTATP6P23-201ENST00000440153 476 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MTND4P18-201ENST00000447010 465 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC233279.1-201ENST00000455300 423 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RNU6-261P-201ENST00000459506 102 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RPL23AP49-201ENST00000492925 468 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC097462.2-201ENST00000504623 481 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC116353.2-201ENST00000505332 712 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC116562.3-201ENST00000506136 177 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MTCO3P9-201ENST00000506989 781 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RNU4-29P-201ENST00000515943 174 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RNA5SP356-201ENST00000515972 94 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC068587.5-201ENST00000528506 175 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 NACAP3-201ENST00000552100 481 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AL121821.2-201ENST00000556081 394 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 ZNF519P2-201ENST00000557032 169 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MIR1273C-201ENST00000578669 77 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 SNORD53-201ENST00000579969 78 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MIR5583-1-201ENST00000580941 59 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RBM11P1-201ENST00000604951 799 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RMST_3.1-201ENST00000611651 109 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC024940.5-201ENST00000622889 474 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC025034.2-201ENST00000623264 286 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MIR3199-2-201ENST00000636243 86 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MIR1321-201ENST00000637766 79 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MIR7515-201ENST00000637837 67 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC024614.3-201ENST00000637860 256 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 Y_RNA.9-201ENST00000362354 101 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 Y_RNA.33-201ENST00000362591 102 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 RNU6-1120P-201ENST00000362988 108 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 RNU6-1085P-201ENST00000363576 107 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 RNU6-461P-201ENST00000364195 107 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 Y_RNA.295-201ENST00000364918 102 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 SNORA70.4-201ENST00000365509 134 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 SNORA69-201ENST00000383895 132 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 Y_RNA.402-201ENST00000383972 102 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 RNU1-52P-201ENST00000384190 164 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 RNA5SP184-201ENST00000411071 108 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 EEF1A1P40-201ENST00000412883 573 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC007560.1-201ENST00000426912 237 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 HMGB1P31-201ENST00000437242 427 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC016691.1-201ENST00000441321 413 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC092001.1-201ENST00000453012 261 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC128713.1-201ENST00000471495 306 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC126389.1-201ENST00000477436 290 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 MTAPP1-201ENST00000489154 819 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC079382.1-201ENST00000493346 557 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC010493.1-201ENST00000513479 292 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 RNU6-1281P-201ENST00000516223 105 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 SNORD27.1-201ENST00000516319 72 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AP005435.4-201ENST00000529514 284 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 ADI1P3-201ENST00000549509 470 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 HIF1AP1-201ENST00000553642 175 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.07□□□□□ -2.08
EBF4Q9BQW3 MIR4775-201ENST00000581168 75 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 MIR4658-201ENST00000584344 65 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 BNIP3P30-201ENST00000601184 574 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AL391813.1-201ENST00000603098 260 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC091152.3-201ENST00000604227 325 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AL121917.1-203ENST00000605534 577 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AC008536.2-201ENST00000607284 349 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.07□□□□□ -2.08
EBF4Q9BQW3 AL359547.2-201ENST00000615810 418 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms