Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC117532.1-201ENST00000514638 323 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.42□□□□□ -2.18
VAT1Q99536 RNU6-970P-201ENST00000516312 107 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 RNU2-10P-201ENST00000516375 211 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 RNU6-201P-201ENST00000517100 61 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.42□□□□□ -2.18
VAT1Q99536 AP003122.4-201ENST00000530980 758 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 AC022616.8-201ENST00000533569 253 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.42□□□□□ -2.18
VAT1Q99536 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.42□□□□□ -2.18
VAT1Q99536 AL158050.2-201ENST00000605336 568 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 AL139022.2-201ENST00000606934 443 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 RNU4-5P-201ENST00000607255 135 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 RMST_6.1-201ENST00000611980 203 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.42□□□□□ -2.18
VAT1Q99536 MIR412-201ENST00000362142 91 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 RNU1-17P-201ENST00000363022 152 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 MIR934-201ENST00000401241 83 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 CBX3P9-201ENST00000402326 552 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 RNU6-174P-201ENST00000410406 106 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 AC009310.1-201ENST00000414414 451 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.41□□□□□ -2.18
VAT1Q99536 AC092648.1-201ENST00000425870 423 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 AL627311.1-201ENST00000431514 115 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 RPL23AP30-201ENST00000432419 501 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 CALM1P1-201ENST00000442082 433 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 AC104058.1-201ENST00000448028 297 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 HSPE1P23-201ENST00000509838 286 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 AC008834.1-201ENST00000511612 175 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.41□□□□□ -2.18
VAT1Q99536 AC112187.2-201ENST00000604345 283 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 AC116312.1-201ENST00000606841 314 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 AL139418.1-201ENST00000613613 177 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 U1.36-201ENST00000620684 176 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 AC005858.4-201ENST00000623191 700 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 AC093648.1-201ENST00000623546 606 ntBASIC1.41□□□□□ -2.18
VAT1Q99536 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
VAT1Q99536 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.41□□□□□ -2.18
VAT1Q99536 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VAT1Q99536 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.41□□□□□ -2.18
VAT1Q99536 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.18
VAT1Q99536 RNU6-931P-201ENST00000363850 107 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 MIR122-201ENST00000385044 85 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 RN7SKP51-201ENST00000410781 304 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.4□□□□□ -2.19
VAT1Q99536 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.4□□□□□ -2.19
VAT1Q99536 MTCO2P21-201ENST00000419780 677 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.4□□□□□ -2.19
VAT1Q99536 USP9YP18-201ENST00000425912 695 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.4□□□□□ -2.19
VAT1Q99536 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.4□□□□□ -2.19
VAT1Q99536 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.4□□□□□ -2.19
VAT1Q99536 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.4□□□□□ -2.19
VAT1Q99536 FO393415.2-201ENST00000480085 343 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.4□□□□□ -2.19
VAT1Q99536 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.4□□□□□ -2.19
VAT1Q99536 AC112206.3-201ENST00000514578 389 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 RNU6-965P-201ENST00000516721 96 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.4□□□□□ -2.19
VAT1Q99536 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.4□□□□□ -2.19
VAT1Q99536 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.4□□□□□ -2.19
VAT1Q99536 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
VAT1Q99536 BNIP3P40-201ENST00000596017 556 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 AC012065.4-201ENST00000602445 679 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.4□□□□□ -2.19
VAT1Q99536 AC103706.2-201ENST00000638080 240 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
VAT1Q99536 ZNF209P-201ENST00000593450 2304 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 ZNF72P-201ENST00000425869 1908 ntBASIC1.4□□□□□ -2.19
VAT1Q99536 MIR126-201ENST00000362291 85 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 RNU1-58P-201ENST00000362413 163 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 RNU6-1210P-201ENST00000363775 107 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 RNU6-157P-201ENST00000383957 107 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 SNORD116-20-201ENST00000384529 92 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 MIR10A-201ENST00000385043 110 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 RNU2-23P-201ENST00000410545 195 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 SRIP3-201ENST00000413200 219 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.39□□□□□ -2.19
VAT1Q99536 AC074117.2-201ENST00000417130 397 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 MTND1P20-201ENST00000430341 950 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 NDUFB1P2-201ENST00000449477 176 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 FDX1P2-201ENST00000450769 375 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.39□□□□□ -2.19
VAT1Q99536 AL353752.1-201ENST00000454946 260 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 snoU13.14-201ENST00000459372 104 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 RN7SKP256-201ENST00000517201 314 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.39□□□□□ -2.19
VAT1Q99536 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.39□□□□□ -2.19
VAT1Q99536 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.39□□□□□ -2.19
VAT1Q99536 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.39□□□□□ -2.19
VAT1Q99536 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.39□□□□□ -2.19
VAT1Q99536 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.39□□□□□ -2.19
VAT1Q99536 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.39□□□□□ -2.19
VAT1Q99536 MIR3118-1-201ENST00000581787 76 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 AL670379.2-201ENST00000604983 252 ntBASIC1.39□□□□□ -2.19
VAT1Q99536 AL670379.4-201ENST00000605279 254 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms