Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 U6.114-201ENST00000636407 96 ntBASIC2.28□□□□□ -2.04
ZNF560Q96MR9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ZNF560Q96MR9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
ZNF560Q96MR9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AP000568.1-201ENST00000282964 442 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 RNU6-622P-201ENST00000384272 103 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 SNORA64-201ENST00000384674 134 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 MIR454-201ENST00000390180 115 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AC138623.1-201ENST00000418060 216 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AL365400.1-201ENST00000431854 640 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 RNU1-86P-201ENST00000516108 154 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 RNU1-107P-201ENST00000516617 154 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 HSPE1P18-201ENST00000517602 280 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AC118273.2-201ENST00000532092 465 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 OR5AL2P-201ENST00000532185 920 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AP002453.2-201ENST00000533503 320 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 CYCSP26-201ENST00000534107 320 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AC073410.2-201ENST00000603240 332 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AC116312.1-201ENST00000606841 314 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AC093788.1-201ENST00000609356 927 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AC011155.2-201ENST00000623202 216 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 AC012640.5-201ENST00000623897 319 ntBASIC2.27□□□□□ -2.05
ZNF560Q96MR9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF560Q96MR9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AL596028.1-201ENST00000326971 197 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AL355497.1-201ENST00000406262 551 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 RNA5SP390-201ENST00000410191 113 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF560Q96MR9 UBE2V1P10-201ENST00000414685 269 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 PIGFP2-201ENST00000421400 651 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 TOMM20P4-201ENST00000427861 435 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 WARS2P1-201ENST00000429678 537 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AL118520.1-201ENST00000450770 291 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AP001025.1-201ENST00000486139 332 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC079804.2-201ENST00000490376 200 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC092436.1-201ENST00000506450 503 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC104136.1-201ENST00000512969 394 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF560Q96MR9 SNORA43.2-201ENST00000516652 128 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 SNORA31.23-201ENST00000517219 133 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 MTCYBP33-201ENST00000575007 1130 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF560Q96MR9 MIR4775-201ENST00000581168 75 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC121247.2-201ENST00000604776 136 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC098614.4-201ENST00000607601 462 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC006566.1-201ENST00000608943 513 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AC008121.3-201ENST00000618726 433 ntBASIC2.26□□□□□ -2.05
ZNF560Q96MR9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF560Q96MR9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZNF560Q96MR9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.25□□□□□ -2.05
ZNF560Q96MR9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
ZNF560Q96MR9 SNORD116-20-201ENST00000384529 92 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 MIR561-201ENST00000385216 97 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.25□□□□□ -2.05
ZNF560Q96MR9 AC074117.2-201ENST00000417130 397 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 C1DP2-201ENST00000418167 426 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 PGBD4P6-201ENST00000421501 610 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 AC008267.5-201ENST00000424928 265 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.25□□□□□ -2.05
ZNF560Q96MR9 AC000111.3-201ENST00000433478 193 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 RPS27AP8-201ENST00000452665 445 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.25□□□□□ -2.05
ZNF560Q96MR9 RNU7-182P-201ENST00000459009 62 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 BET1P1-201ENST00000482276 359 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 AC091965.2-201ENST00000512324 613 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 MTCO3P28-201ENST00000513351 515 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 SNORA48.11-201ENST00000517015 89 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.25□□□□□ -2.05
ZNF560Q96MR9 BNIP3P6-201ENST00000549284 499 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 RPL30P11-203ENST00000598995 310 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 AL161423.1-201ENST00000613700 262 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 uc_338.15-201ENST00000615470 191 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 uc_338.11-201ENST00000619132 160 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 RMST_7.1-201ENST00000621935 268 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 SEPT14P19-203ENST00000633205 211 ntBASIC2.25□□□□□ -2.05
ZNF560Q96MR9 SNORA62.1-201ENST00000364287 154 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 RNU6-116P-201ENST00000384042 109 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 MIR186-201ENST00000384988 86 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 RNU6-550P-201ENST00000391057 101 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AL023284.1-201ENST00000403956 276 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 MIR1261-201ENST00000408659 82 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 RNU4-26P-201ENST00000410270 107 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 RN7SKP284-201ENST00000411002 343 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 RNU6-607P-201ENST00000411283 108 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 BX295541.1-201ENST00000417774 250 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms