Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC069113.1-201ENST00000517763 267 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 RNU6-323P-201ENST00000521915 107 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 IGKV3-31-201ENST00000523109 329 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 AC087241.2-201ENST00000535801 324 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNX27Q96L92 MIR5692C1-201ENST00000585309 91 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX27Q96L92 NUTF2P8-201ENST00000604593 363 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX27Q96L92 U1.23-201ENST00000610293 146 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNX27Q96L92 AL355073.2-201ENST00000612106 557 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 RNU1-68P-201ENST00000615382 146 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 AC022306.2-201ENST00000617563 647 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX27Q96L92 U1.39-201ENST00000621562 146 ntBASIC3.36□□□□□ -1.87
SNX27Q96L92 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SNX27Q96L92 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNX27Q96L92 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNX27Q96L92 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SNX27Q96L92 AC008264.2-201ENST00000610193 3731 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 RNU6-254P-201ENST00000363377 107 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 SNORD67-201ENST00000390833 111 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 SAR1AP2-201ENST00000392696 594 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 MIR450B-201ENST00000401182 78 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 MIR1289-2-201ENST00000408360 111 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.35□□□□□ -1.87
SNX27Q96L92 USP9YP8-201ENST00000441913 500 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.35□□□□□ -1.87
SNX27Q96L92 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.35□□□□□ -1.87
SNX27Q96L92 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.35□□□□□ -1.87
SNX27Q96L92 RNU7-66P-201ENST00000459469 62 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX27Q96L92 AC046134.1-201ENST00000514454 666 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 RNA5SP480-201ENST00000516840 109 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 AC104027.1-201ENST00000521887 300 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX27Q96L92 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.35□□□□□ -1.87
SNX27Q96L92 UBE2V2P2-201ENST00000587677 504 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 AC078899.3-201ENST00000599065 212 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 AC107871.2-201ENST00000612894 502 ntBASIC3.35□□□□□ -1.87
SNX27Q96L92 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNX27Q96L92 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX27Q96L92 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 RNU5E-4P-201ENST00000364931 120 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 XGY1-201ENST00000381172 446 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 RN7SKP220-201ENST00000410611 288 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 BPY2DP-201ENST00000422208 265 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 MTCO3P46-201ENST00000425787 232 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX27Q96L92 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX27Q96L92 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX27Q96L92 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX27Q96L92 BTF3P15-201ENST00000455606 336 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.34□□□□□ -1.87
SNX27Q96L92 snoU109.2-201ENST00000459316 135 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 RNU7-23P-201ENST00000459465 62 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 AC026801.1-201ENST00000497178 464 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX27Q96L92 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX27Q96L92 RNU6-507P-201ENST00000516045 100 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNX27Q96L92 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX27Q96L92 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SNX27Q96L92 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX27Q96L92 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.34□□□□□ -1.87
SNX27Q96L92 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SNX27Q96L92 AC104260.1-201ENST00000616660 539 ntBASIC3.34□□□□□ -1.87
SNX27Q96L92 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
SNX27Q96L92 MTND4P12-201ENST00000498999 1377 ntBASIC3.34□□□□□ -1.88
SNX27Q96L92 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNX27Q96L92 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SNX27Q96L92 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SNX27Q96L92 AC010680.1-201ENST00000590024 3590 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC110491.1-201ENST00000562191 2010 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC073325.2-201ENST00000339545 159 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 Y_RNA.70-201ENST00000362886 110 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 SNORA14A-201ENST00000364773 135 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 RNU6-898P-201ENST00000365627 104 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 MIR499A-201ENST00000384903 122 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 MTND3P8-201ENST00000412909 339 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.33□□□□□ -1.88
SNX27Q96L92 AC016831.2-201ENST00000417179 352 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC098831.1-201ENST00000440661 216 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX27Q96L92 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX27Q96L92 RNU6-329P-201ENST00000459618 107 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX27Q96L92 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX27Q96L92 AC091951.2-201ENST00000500762 203 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX27Q96L92 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX27Q96L92 RNA5SP367-201ENST00000516557 118 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 SNORD59.2-201ENST00000516873 68 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC026464.5-201ENST00000562497 722 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX27Q96L92 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX27Q96L92 MIR4742-201ENST00000581069 85 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC005498.1-201ENST00000592125 465 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms