Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MIR6134-201ENST00000617606 109 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AC006111.3-201ENST00000622137 383 ntBASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.14□□□□□ -1.91
CTHRC1Q96CG8 AL353746.1-201ENST00000566293 6881 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 RNU6-78P-201ENST00000362897 107 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.112-201ENST00000363250 102 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 RNA5SP50-201ENST00000363731 107 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AP002088.1-201ENST00000382740 395 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 RNU6-842P-201ENST00000384269 107 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 SNORA41-201ENST00000384675 132 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 MIR521-1-201ENST00000384902 87 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 MIR184-201ENST00000384962 84 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AL356968.1-201ENST00000416622 474 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AL137792.2-201ENST00000443484 235 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 PRSS3P4-201ENST00000453323 162 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AC010401.1-201ENST00000463867 348 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AC068781.1-201ENST00000488231 618 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 RPL23AP49-201ENST00000492925 468 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 RPS27AP10-201ENST00000496103 208 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 PTP4A1P4-201ENST00000512479 322 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 PHBP14-201ENST00000512887 367 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 SCARNA16.2-201ENST00000516520 172 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AP005902.1-201ENST00000521358 186 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AL451007.1-201ENST00000595491 289 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 AC024153.1-201ENST00000603103 365 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 SRGNP1-201ENST00000603392 451 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 MIR3976-201ENST00000606807 139 ntBASIC3.13□□□□□ -1.91
CTHRC1Q96CG8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 RNU6-428P-201ENST00000362942 107 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.132-201ENST00000363421 102 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 RNU6-1280P-201ENST00000365211 107 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 U8.8-201ENST00000365399 135 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 MIR518D-201ENST00000385014 87 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 RNU6-174P-201ENST00000410406 106 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AL591043.1-201ENST00000432461 424 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AC022493.2-201ENST00000506122 481 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 RNA5SP384-201ENST00000516615 116 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 SNORA43.2-201ENST00000516652 128 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AC022634.1-201ENST00000520765 532 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 IGHV3-76-201ENST00000522465 295 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AL391261.3-201ENST00000557194 520 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 VN1R107P-201ENST00000601784 209 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AC007179.3-201ENST00000604976 235 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 MIR8076-201ENST00000611401 83 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 MIR3199-2-201ENST00000636243 86 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 ADAM3A-203ENST00000461344 2157 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 AC110491.1-201ENST00000562191 2010 ntBASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTHRC1Q96CG8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.28-201ENST00000362554 111 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 RNVU1-14-201ENST00000384770 164 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 BPY2DP-201ENST00000422208 265 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AC011816.1-201ENST00000441346 546 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AL035666.1-201ENST00000446195 348 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AP002884.2-201ENST00000471647 395 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 RPS29P20-201ENST00000489592 171 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AC074250.1-201ENST00000511117 192 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 RNU6-612P-201ENST00000516909 102 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 AC016925.2-201ENST00000605108 242 ntBASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 MIR7153-201ENST00000637758 57 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 317.2 ms